Hi Michael,<div><br></div><div>There is a new option '-stop' that you can pass to streamtrack. I think it was introduced in version 0.2.8. That should be what you're looking for.</div><div>Cheers,</div><div><br>
</div><div>Donald.</div><div><br></div><div><br><div class="gmail_quote">On 8 June 2010 09:47, Michael Zeineh <span dir="ltr"><<a href="mailto:mmzeineh@gmail.com">mmzeineh@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">
Hi,<br>
<br>
Is there a way with mrtrix for the fiber tracking to stop when it hits<br>
(or before it leaves) an inclusion region? This would be a nice option<br>
to only extract the tracks of interest between two ROIs. Right now, if<br>
I have two ROIs, tracks seem to go beyond both after going through<br>
either ROI.<br>
<br>
Thank you,<br>
Michael<br>
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</blockquote></div><br><br clear="all"><br>-- <br>Jacques-Donald Tournier (PhD)<br>Brain Research Institute, Melbourne, Australia<br>Tel: +61 (0)3 9496 4078<br>
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