<div style="font-family: 'Times New Roman'; font-size: 16px;">Thank you so much Rob, now everything works just fine.<br _moz_dirty="" /><br _moz_dirty="" />I have i little doubt about the tracking, when I do it, some regions have spurious tracks, so as you said I will include some exclude ROIs but, my doubt is, the track I don't want are in regions belonging other tracts that i will track latter, should I use a mask of each tract as excluding region, or just some parts of them??'<br _moz_dirty="" /><br /><br /><span>El 25/11/11, <b class="name">Robert Smith </b> <r.smith@brain.org.au> escribió:</span><blockquote cite="mid:CAAVKx7Ue6ioPNkvGz5Jtx57t-DqempmXV5-ZymkeD6E5ES9KUQ@mail.gmail.com" class="iwcQuote" style="border-left: 1px solid rgb(0, 0, 255); padding-left: 13px; margin-left: 0pt;" type="cite"><div class="mimepart text html"><div>Gabriel<br clear="all" /></div><div><br /></div><div>From that error message, it looks like you're running either MRtrix 0.2.8 or 0.2.9. The files I provided were from the subversion repository (which contains the most up-to-date code), but it would seem that there's an incompatibility between this code and the numbered releases.</div>
<div><br /></div><div>The attached files (again to replace those in src/dwi/tractography/tracker/) should compile on either 0.2.8 or 0.2.9. They will fix the issue with the -stop command, without modifying the tracking in any other way.</div>
<div><br /></div>Rob<br clear="all" /><br />--<br /><br />Robert Smith<br />Melbourne Brain Centre<br />245 Burgundy Street<br />Heidelberg VIC 3084<br />Telephone: (+61 3) 9035 7128<br />Fax: (+61 3) 9035 7301<br />Email: r.smith@brain.org.au <r.smith@brain.org.au><br />
<a href="http://www.fni.edu.au" target="_blank">www.florey.edu.au</a> <a href="http://www.brain.org.au" target="_blank">www.brain.org.au</a><br /><br />
<br /><br /><div class="gmail_quote">On Fri, Nov 25, 2011 at 8:23 PM, Gabriel Gonzalez Escamilla <span dir="ltr"><ggonesc@upo.es <ggonesc@upo.es>></span> wrote:<br /><blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
<div style="font-family: 'Times New Roman'; font-size: 16px;">Dear Robert, <br />I was trying to compile again the MRtrix, but it gave an error message:<br /><br />ERROR: [CC] cmd/streamtrack.o<br /><br />g++ -c wall -march=native -fPIC -fno-strict-aliasing -DGL_GLEXT_PROTOTYPES -DUSE_TR1 -03 -pthread -I/user/include/glibmm-2.4 -I/user/lib/glibmm-2.4/include -I/user/include/sigc++-2.0 -I/user/lib/sigc++-2.0/include -I/user/include/glib-2.0 -I/user/lib/glib-2.0/include -Ilib -Isrc cmd/streamtrack.cpp -o cmd/streamtrack.o<br />
<br />failed with ourtput:<br /><br />cmd/streamtrack.cpp: In member function ´void Threader::execute(MR::DWITractography::Tracker::Base*)´:<br />cmd/streamtrack.cpp.270: error: no matching function for call to MR::DWI::Tractography::Tracker::Base::new_seed(const MR::Point&)´<br />
src/dwi/tractography/tracker/base.h:65: note: candidates are: void MR::DWI::Tractography::Tracker::Base::new_seed(const MR::Point&, float)<br /><br /><br /><span>Do you have any idea of what's happening?<br /><br />Best Regards,<br />
Gabriel<br /></span></div>
</blockquote></div><br />
</div></blockquote></div><br />-- <br /><font size="3">--------------------------<br />PhD. student Gabriel González-Escamilla<br />Laboratory of Functional Neuroscience<br />Department of Physiology, Anatomy, and Cell Biology<br />University Pablo de Olavide<br />Ctra. de Utrera, Km.1<br />41013 - Seville<br />- Spain -<br /><br />Email: ggonesc@upo.es<br />http://www.upo.es/neuroaging/es/</font>