Hi Kirles<br><br>That's an unusual one; the first time I've heard of it. Unfortunately it probably won't be easy to reproduce at our end, so we might need your help tracking the problem down.<br><br>The first step would be to restart your computer, and re-run the tracking without any other programs running. Sometimes if one program has a memory leak it can corrupt the working memory of other programs, and cause all sorts of weirdness.<br>
<br>Secondly, how are you executing the tracking? Is it in a standard terminal, or something more fancy? (Some environments may contain a so-called "watch-dog", which tries to detect when a program is malfunctioning and kills it. One thing these systems look for is programs stuck in an infinite loop, which is pretty much what the tracking is)<br>
<br>If that doesn't work, the next step would be to re-compile MRtrix in debug mode, and run the program with a debugger. Normally I use gdb, but if you're running on Windows (which I suspect might be the case based on that error message), someone else on the mailing list may be familiar with what's available and what works.<br>
<br>Could you also please provide us with the version of MRtrix you are running, and the system you are running it on.<br><br>Thanks<br>Rob<br clear="all"><br>--<br><br>Robert Smith<br>Melbourne Brain Centre<br>245 Burgundy Street<br>
Heidelberg VIC 3084<br>Telephone: (+61 3) 9035 7128<br>Fax: (+61 3) 9035 7301<br>Email: <a href="mailto:r.smith@brain.org.au" target="_blank">r.smith@brain.org.au</a><br><a href="http://www.fni.edu.au" target="_blank">www.florey.edu.au</a> <a href="http://www.brain.org.au" target="_blank">www.brain.org.au</a><br>
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<br><br><div class="gmail_quote">On Fri, May 25, 2012 at 6:12 AM, Kirles Bishay <span dir="ltr"><<a href="mailto:kirles@ualberta.ca" target="_blank">kirles@ualberta.ca</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hello,<div><br></div><div>I've been having a problem with the whole brain tracking step of the MRtrix software on my new computer. When I put in the command to create a whole brain track image, it will start the step, but part way through it will stop and an error message will pop up reading: "This application has requested the Runtime to terminate it in an unusual way. Please contact the application's support team for more information". Any ideas on why this is occurring and how to fix it? Thank you for your help in advance.</div>
<div><br></div><div>Best,</div><div><br></div><div>Kirles</div>
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