<html>
<head>
<meta content="text/html; charset=ISO-8859-1"
http-equiv="Content-Type">
</head>
<body bgcolor="#FFFFFF" text="#000000">
<div class="moz-cite-prefix">Dear Valerio,<br>
<br>
I had the same problem recently, and Jon Clayden kindly provided a
fix in the latest development version of MRtrix. Try with this
binary:<br>
<br>
<meta http-equiv="content-type" content="text/html;
charset=ISO-8859-1">
<a href="https://code.google.com/p/mrtrix/source/checkout">https://code.google.com/p/mrtrix/source/checkout</a><br>
<br>
<pre class="moz-signature" cols="72">Kind regards,
Ivan Alvarez
PhD Candidate
Imaging and Biophysics Unit
UCL Institute of Child Health
30 Guilford Street, London, WC1N 1EH</pre>
On 05/11/13 13:47, <a class="moz-txt-link-abbreviated" href="mailto:Valerio.Zerbi@radboudumc.nl">Valerio.Zerbi@radboudumc.nl</a> wrote:<br>
</div>
<blockquote
cite="mid:3D181FAE76F1154781AB020200FB7F053B6272AC@UMCEXMBX11.umcn.nl"
type="cite">
<meta http-equiv="Content-Type" content="text/html;
charset=ISO-8859-1">
<style type="text/css" id="owaParaStyle"></style>
<div style="direction: ltr;font-family: Tahoma;color:
#000000;font-size: 10pt;">Dear Donald,
<div><br>
</div>
<div>after a clean install of all the dependences required via
PORT (<span style="font-size: 10pt; background-color: rgb(255,
255, 255);">port install glib2 glibmm libpng gtk2 gtkmm
gtkglext gsl pkgconfig) I am now stuck in the way of
compiling MRTrix. When I say ./build I got this error:</span></div>
<div><span style="font-size: 10pt; background-color: rgb(255,
255, 255);"><br>
</span></div>
<div><span style="font-size: 10pt; background-color: rgb(255,
255, 255);"><br>
</span></div>
<div>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
bash-3.2$ cd mrtrix-0.2.11</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
bash-3.2$ ./build</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
[CC] lib/file/dicom/quick_scan.o[CC] cmd/streamtrack.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
[CC] lib/file/dicom/study.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
[CC] src/mrview/sidebar/orientation_plot.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
[CC] lib/file/dicom/patient.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
[CC] lib/image/header.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
[CC] cmd/mrabs.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
[CC] src/mrview/sidebar/overlay.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
ERROR: [CC] lib/file/dicom/quick_scan.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
g++ -c -Wall -mtune=native -fPIC -fno-strict-aliasing
-DGL_GLEXT_PROTOTYPES -DUSE_TR1 -I/opt/local/include -O2
-D_REENTRANT -I/opt/local/include/glibmm-2.4
-I/opt/local/lib/glibmm-2.4/include
-I/opt/local/include/sigc++-2.0
-I/opt/local/lib/sigc++-2.0/include
-I/opt/local/include/glib-2.0
-I/opt/local/lib/glib-2.0/include -I/opt/local/include -Ilib
-Isrc lib/file/dicom/quick_scan.cpp -o
lib/file/dicom/quick_scan.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
failed with output:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/quick_scan.cpp:32:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/element.h:30:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
lib/hash_map.h:35:12: fatal error: 'tr1/unordered_map' file
not found</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
# include <tr1/unordered_map></p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
1 error generated.</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
STOP</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
ERROR: [CC] lib/file/dicom/study.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
g++ -c -Wall -mtune=native -fPIC -fno-strict-aliasing
-DGL_GLEXT_PROTOTYPES -DUSE_TR1 -I/opt/local/include -O2
-D_REENTRANT -I/opt/local/include/glibmm-2.4
-I/opt/local/lib/glibmm-2.4/include
-I/opt/local/include/sigc++-2.0
-I/opt/local/lib/sigc++-2.0/include
-I/opt/local/include/glib-2.0
-I/opt/local/lib/glib-2.0/include -I/opt/local/include -Ilib
-Isrc lib/file/dicom/study.cpp -o lib/file/dicom/study.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
failed with output:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/study.cpp:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/patient.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/study.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/series.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/image.h:35:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/element.h:30:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
lib/hash_map.h:35:12: fatal error: 'tr1/unordered_map' file
not found</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
# include <tr1/unordered_map></p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
1 error generated.</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
STOP</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
ERROR: [CC] cmd/streamtrack.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
g++ -c -Wall -mtune=native -fPIC -fno-strict-aliasing
-DGL_GLEXT_PROTOTYPES -DUSE_TR1 -I/opt/local/include -O2
-D_REENTRANT -I/opt/local/include/glibmm-2.4
-I/opt/local/lib/glibmm-2.4/include
-I/opt/local/include/sigc++-2.0
-I/opt/local/lib/sigc++-2.0/include
-I/opt/local/include/glib-2.0
-I/opt/local/lib/glib-2.0/include -I/opt/local/include -Ilib
-Isrc cmd/streamtrack.cpp -o cmd/streamtrack.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
failed with output:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
cmd/streamtrack.cpp:262:18: error: call to 'round' is
ambiguous</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
min_size = round (to<float>
(properties["min_dist"]) / to<float>
(properties["step_size"]));</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^~~~~</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cmath:1552:46:
note: candidate function</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
inline _LIBCPP_INLINE_VISIBILITY float round(float
__x) _NOEXCEPT {return roundf(__x);}</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
lib/mrtrix.h:383:14: note: candidate function</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
inline int round (float x) { return (int (x + (x > 0.0
? 0.5 : -0.5))); }</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
/usr/include/math.h:490:15: note: candidate function</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
extern double round(double);</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/c++/v1/cmath:1553:46:
note: candidate function</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
inline _LIBCPP_INLINE_VISIBILITY long double round(long
double __x) _NOEXCEPT {return roundl(__x);}</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
1 error generated.</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
STOP</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
ERROR: [CC] src/mrview/sidebar/overlay.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
g++ -c -Wall -mtune=native -fPIC -fno-strict-aliasing
-DGL_GLEXT_PROTOTYPES -DUSE_TR1 -I/opt/local/include -O2
-D_REENTRANT -I/opt/local/include/gtkmm-2.4
-I/opt/local/lib/gtkmm-2.4/include
-I/opt/local/include/atkmm-1.6
-I/opt/local/include/gtk-unix-print-2.0
-I/opt/local/include/gtk-2.0 -I/opt/local/include/gdkmm-2.4
-I/opt/local/lib/gdkmm-2.4/include
-I/opt/local/include/giomm-2.4
-I/opt/local/lib/giomm-2.4/include
-I/opt/local/include/pangomm-1.4
-I/opt/local/lib/pangomm-1.4/include
-I/opt/local/include/glibmm-2.4
-I/opt/local/lib/glibmm-2.4/include
-I/opt/local/include/cairomm-1.0
-I/opt/local/lib/cairomm-1.0/include
-I/opt/local/include/sigc++-2.0
-I/opt/local/lib/sigc++-2.0/include
-I/opt/local/include/gtkglext-1.0
-I/opt/local/lib/gtkglext-1.0/include -I/opt/local/include
-I/opt/local/include/gtk-2.0
-I/opt/local/lib/gtk-2.0/include
-I/opt/local/include/pango-1.0 -I/opt/local/include/gtk-2.0
-I/opt/local/lib/gtk-2.0/include
-I/opt/local/include/pango-1.0
-I/opt/local/include/gio-unix-2.0/ -I/opt/local/include
-I/opt/local/include/cairo -I/opt/local/include/atk-1.0
-I/opt/local/include/cairo -I/opt/local/include/pixman-1
-I/opt/local/include/libpng15 -I/opt/local/include
-I/opt/local/include/gdk-pixbuf-2.0
-I/opt/local/include/libpng15 -I/opt/local/include/pango-1.0
-I/opt/local/include/harfbuzz -I/opt/local/include/pango-1.0
-I/opt/local/include/glib-2.0
-I/opt/local/lib/glib-2.0/include -I/opt/local/include
-I/opt/local/include/freetype2 -I/opt/local/include
-I/opt/local/include/freetype2 -I/opt/local/include -Ilib
-Isrc src/mrview/sidebar/overlay.cpp -o
src/mrview/sidebar/overlay.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
failed with output:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/mrview/sidebar/overlay.cpp:26:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/mrview/window.h:36:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/mrview/display_area.h:28:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
src/mrview/pane.h:66:11: warning: 'gluProject' is
deprecated: first deprecated in OS X 10.9 - "Use
GLKMathProject" [-Wdeprecated-declarations]</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
gluProject (pos[0], pos[1], pos[2], modelview,
projection, viewport, &wx, &wy, &wz);</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
/System/Library/Frameworks/OpenGL.framework/Headers/glu.h:280:14:
note: 'gluProject' declared here</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
extern GLint gluProject (GLdouble objX, GLdouble objY,
GLdouble objZ, const GLdouble *model, const GLdouble *proj,
const GLint *view, GLdouble* winX, GLdouble* winY, GLdouble*
winZ) OPENGL_DEPRECATED_MSG(10_0, 10_9, "Use
GLKMathProject");</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/mrview/sidebar/overlay.cpp:26:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/mrview/window.h:36:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/mrview/display_area.h:28:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
src/mrview/pane.h:73:11: warning: 'gluUnProject' is
deprecated: first deprecated in OS X 10.9 - "Use
GLKMathUnproject" [-Wdeprecated-declarations]</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
gluUnProject (pos[0], pos[1], pos[2], modelview,
projection, viewport, &wx, &wy, &wz);</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
/System/Library/Frameworks/OpenGL.framework/Headers/glu.h:297:14:
note: 'gluUnProject' declared here</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
extern GLint gluUnProject (GLdouble winX, GLdouble winY,
GLdouble winZ, const GLdouble *model, const GLdouble *proj,
const GLint *view, GLdouble* objX, GLdouble* objY, GLdouble*
objZ) OPENGL_DEPRECATED_MSG(10_0, 10_9, "Use
GLKMathUnproject");</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/mrview/sidebar/overlay.cpp:28:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/dialog/file.h:37:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/tree.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/patient.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/study.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/series.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/image.h:35:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/element.h:30:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
lib/hash_map.h:35:12: fatal error: 'tr1/unordered_map' file
not found</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
# include <tr1/unordered_map></p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
2 warnings and 1 error generated.</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
STOP</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
ERROR: [CC] src/mrview/sidebar/orientation_plot.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
g++ -c -Wall -mtune=native -fPIC -fno-strict-aliasing
-DGL_GLEXT_PROTOTYPES -DUSE_TR1 -I/opt/local/include -O2
-D_REENTRANT -I/opt/local/include/gtkmm-2.4
-I/opt/local/lib/gtkmm-2.4/include
-I/opt/local/include/atkmm-1.6
-I/opt/local/include/gtk-unix-print-2.0
-I/opt/local/include/gtk-2.0 -I/opt/local/include/gdkmm-2.4
-I/opt/local/lib/gdkmm-2.4/include
-I/opt/local/include/giomm-2.4
-I/opt/local/lib/giomm-2.4/include
-I/opt/local/include/pangomm-1.4
-I/opt/local/lib/pangomm-1.4/include
-I/opt/local/include/glibmm-2.4
-I/opt/local/lib/glibmm-2.4/include
-I/opt/local/include/cairomm-1.0
-I/opt/local/lib/cairomm-1.0/include
-I/opt/local/include/sigc++-2.0
-I/opt/local/lib/sigc++-2.0/include
-I/opt/local/include/gtkglext-1.0
-I/opt/local/lib/gtkglext-1.0/include -I/opt/local/include
-I/opt/local/include/gtk-2.0
-I/opt/local/lib/gtk-2.0/include
-I/opt/local/include/pango-1.0 -I/opt/local/include/gtk-2.0
-I/opt/local/lib/gtk-2.0/include
-I/opt/local/include/pango-1.0
-I/opt/local/include/gio-unix-2.0/ -I/opt/local/include
-I/opt/local/include/cairo -I/opt/local/include/atk-1.0
-I/opt/local/include/cairo -I/opt/local/include/pixman-1
-I/opt/local/include/libpng15 -I/opt/local/include
-I/opt/local/include/gdk-pixbuf-2.0
-I/opt/local/include/libpng15 -I/opt/local/include/pango-1.0
-I/opt/local/include/harfbuzz -I/opt/local/include/pango-1.0
-I/opt/local/include/glib-2.0
-I/opt/local/lib/glib-2.0/include -I/opt/local/include
-I/opt/local/include/freetype2 -I/opt/local/include
-I/opt/local/include/freetype2 -I/opt/local/include -Ilib
-Isrc src/mrview/sidebar/orientation_plot.cpp -o
src/mrview/sidebar/orientation_plot.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
failed with output:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from
src/mrview/sidebar/orientation_plot.cpp:40:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from src/dialog/file.h:37:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/tree.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/patient.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/study.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/series.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/image.h:35:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/element.h:30:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
lib/hash_map.h:35:12: fatal error: 'tr1/unordered_map' file
not found</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
# include <tr1/unordered_map></p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
1 error generated.</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
ERROR: [CC] lib/file/dicom/patient.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
g++ -c -Wall -mtune=native -fPIC -fno-strict-aliasing
-DGL_GLEXT_PROTOTYPES -DUSE_TR1 -I/opt/local/include -O2
-D_REENTRANT -I/opt/local/include/glibmm-2.4
-I/opt/local/lib/glibmm-2.4/include
-I/opt/local/include/sigc++-2.0
-I/opt/local/lib/sigc++-2.0/include
-I/opt/local/include/glib-2.0
-I/opt/local/lib/glib-2.0/include -I/opt/local/include -Ilib
-Isrc lib/file/dicom/patient.cpp -o lib/file/dicom/patient.o</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
STOP</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
failed with output:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/patient.cpp:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/patient.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/study.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/series.h:27:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/image.h:35:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
In file included from lib/file/dicom/element.h:30:</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
lib/hash_map.h:35:12: fatal error: 'tr1/unordered_map' file
not found</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
# include <tr1/unordered_map></p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
^</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
1 error generated.</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo; min-height: 13px;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
STOP</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
Any clue how to solve this??</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
thank you,</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
<br>
</p>
<p style="margin-right: 0px; margin-left: 0px; font-size:
11px; font-family: Menlo;">
Valerio</p>
</div>
</div>
<br clear="all">
<p style="font-size:13px;font-family:arial;"> Het Radboudumc staat
geregistreerd bij de Kamer van Koophandel in het handelsregister
onder nummer 41055629.<br>
The Radboud university medical centre is listed in the
Commercial Register of the Chamber of Commerce under file number
41055629.<br>
</p>
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<br>
<pre wrap="">_______________________________________________
Mrtrix-discussion mailing list
<a class="moz-txt-link-abbreviated" href="mailto:Mrtrix-discussion@www.nitrc.org">Mrtrix-discussion@www.nitrc.org</a>
<a class="moz-txt-link-freetext" href="http://www.nitrc.org/mailman/listinfo/mrtrix-discussion">http://www.nitrc.org/mailman/listinfo/mrtrix-discussion</a>
</pre>
</blockquote>
<br>
</body>
</html>