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Dear Markus,<br>
<br>
With the command 'dpkg -L mrtrix' you get a list of files that
belong to the package; From that you can detect the commands and
it's paths:<br>
/usr<br>
/usr/share<br>
/usr/share/doc<br>
/usr/share/doc/mrtrix<br>
/usr/share/doc/mrtrix/copyright<br>
/usr/share/doc/mrtrix/changelog.Debian.gz<br>
/usr/share/doc/mrtrix/README.Debian<br>
/usr/share/pixmaps<br>
/usr/share/pixmaps/mrtrix.xpm<br>
/usr/share/menu<br>
/usr/share/menu/mrtrix<br>
/usr/share/man<br>
/usr/share/man/man1<br>
/usr/share/man/man1/mrtrix.1.gz<br>
/usr/share/applications<br>
/usr/share/applications/mrtrix.desktop<br>
/usr/bin<br>
/usr/lib<br>
/usr/lib/mrtrix<br>
/usr/lib/mrtrix/bin<br>
/usr/lib/mrtrix/bin/resample_tracks<br>
/usr/lib/mrtrix/bin/import_tracks<br>
/usr/lib/mrtrix/bin/sdeconv<br>
/usr/lib/mrtrix/bin/read_ximg<br>
/usr/lib/mrtrix/bin/read_dicom<br>
/usr/lib/mrtrix/bin/streamtrack<br>
/usr/lib/mrtrix/bin/gendir<br>
/usr/lib/mrtrix/bin/mrtransform<br>
/usr/lib/mrtrix/bin/mrinfo<br>
/usr/lib/mrtrix/bin/tensor2ADC<br>
/usr/lib/mrtrix/bin/mrmult<br>
/usr/lib/mrtrix/bin/tracks2prob<br>
/usr/lib/mrtrix/bin/dwi2tensor<br>
/usr/lib/mrtrix/bin/bogus<br>
/usr/lib/mrtrix/bin/dir2amp<br>
/usr/lib/mrtrix/bin/mrstats<br>
/usr/lib/mrtrix/bin/threshold<br>
/usr/lib/mrtrix/bin/dwi2SH<br>
/usr/lib/mrtrix/bin/csdeconv<br>
/usr/lib/mrtrix/bin/estimate_response<br>
/usr/lib/mrtrix/bin/average<br>
/usr/lib/mrtrix/bin/mrabs<br>
/usr/lib/mrtrix/bin/median3D<br>
/usr/lib/mrtrix/bin/sample_tracks<br>
/usr/lib/mrtrix/bin/disp_profile<br>
/usr/lib/mrtrix/bin/truncate_tracks<br>
/usr/lib/mrtrix/bin/track_info<br>
/usr/lib/mrtrix/bin/mrcat<br>
/usr/lib/mrtrix/bin/dicom_filename<br>
/usr/lib/mrtrix/bin/gen_unit_warp<br>
/usr/lib/mrtrix/bin/mrview<br>
/usr/lib/mrtrix/bin/gen_WM_mask<br>
/usr/lib/mrtrix/bin/mrconvert<br>
/usr/lib/mrtrix/bin/gen_ROI<br>
/usr/lib/mrtrix/bin/mradd<br>
/usr/lib/mrtrix/bin/tensor2vector<br>
/usr/lib/mrtrix/bin/normalise_tracks<br>
/usr/lib/mrtrix/bin/find_SH_peaks<br>
/usr/lib/mrtrix/bin/erode<br>
/usr/lib/mrtrix/bin/tensor2FA<br>
/usr/lib/mrtrix/bin/tensor_metric<br>
/usr/lib/mrtrix/lib<br>
/usr/lib/mrtrix/lib/libmrtrix-0_2_9.so<br>
/usr/share/man/man1/mrview.1.gz<br>
/usr/bin/mrview<br>
<br>
Regards,<br>
<br>
Sjaak van Asten.<br>
<br>
<br>
<div class="moz-cite-prefix">On 01/27/2014 03:20 PM, Markus Gschwind
wrote:<br>
</div>
<blockquote
cite="mid:CABaUQnxCp9eE9btJLXCfP=xZGek-VSWP4aysiCqUvPruZ+Jd2g@mail.gmail.com"
type="cite">
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charset=ISO-8859-1">
<div dir="ltr">Dear Donald and others,<br>
<br>
I tried to install mrtrix on a machine running Ubuntu 12.04.<br>
<br>
Following the recommendations, I found the installation
instructions here: <a moz-do-not-send="true"
href="http://neuro.debian.net/install_pkg.html?p=mrtrix">http://neuro.debian.net/install_pkg.html?p=mrtrix</a><br>
using the single command:
<div><br>
<font face="courier new, monospace">sudo apt-get install
mrtrix</font></div>
<div><font face="courier new, monospace"><br>
</font></div>
<div style=""><font face="arial, helvetica, sans-serif">I am now
not sure If I need to proceed with the build step as usual.</font></div>
<div style=""><font face="arial, helvetica, sans-serif"><br>
</font></div>
<div style=""><font face="arial, helvetica, sans-serif">It seems
that mrview already works, however, the installation doesn't
seem complete... especially I do not know where the mrtrix
package is now...</font></div>
<div style=""><font face="arial, helvetica, sans-serif"><br>
</font></div>
<div style=""><font face="arial, helvetica, sans-serif">~$ which
mrview </font></div>
<div style=""><font face="arial, helvetica, sans-serif">/usr/bin/mrview</font></div>
<div style=""><span
style="font-family:arial,helvetica,sans-serif"><br>
</span></div>
<div style=""><span
style="font-family:arial,helvetica,sans-serif">and </span></div>
<div style="">
<div><font face="arial, helvetica, sans-serif">~$ ls
/usr/bin/mr*</font></div>
<div><font face="arial, helvetica, sans-serif">/usr/bin/mrd
/usr/bin/mren /usr/bin/mrview</font></div>
<div style="font-family:arial,helvetica,sans-serif"><br>
</div>
</div>
<div style=""><span
style="font-family:arial,helvetica,sans-serif">Could you
give me some advice how to test and how to complete this
installation, please?</span><br>
</div>
<div style=""><span
style="font-family:arial,helvetica,sans-serif"><br>
</span></div>
<div style=""><span
style="font-family:arial,helvetica,sans-serif">Thank you so
much!!</span></div>
<div style=""><font face="arial, helvetica, sans-serif">Kind
regards,</font></div>
<div style=""><font face="arial, helvetica, sans-serif">Markus</font></div>
</div>
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<br>
<pre wrap="">_______________________________________________
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</pre>
</blockquote>
<br>
<pre class="moz-signature" cols="72">--
Kind regards,
Drs.Ing. Sjaak (Jack) van Asten
NMR Research Engineer
Radiology and Nuclear medicine
<a class="moz-txt-link-abbreviated" href="mailto:Sjaak.vanAsten@radboudumcn.nl">Sjaak.vanAsten@radboudumcn.nl</a>
M +31 (0)6 420 60 726 / T +31 (0)24 36 68392/14545 / F +31 (0)24 3540866
Radboud university medical center
P.O.Box 9101, 6500 HB Nijmegen (115), The Netherlands
Geert Grooteplein-Zuid 10 (route 767), 6525 GA Nijmegen, The Netherlands
<a class="moz-txt-link-abbreviated" href="http://www.radboudumc.nl">www.radboudumc.nl</a> / biomr.runmc-radiology.nl
Present: Monday / Friday 8:45 to 17:15 (Monday and Thursday to 15:15)
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