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Dear MRtrix community,<br>
<br>
For reasons unknown, mrview has ceased to function for me, when previously it has worked. It no longer produces a GUI, when run. I can not think of any changes I've made that could have caused this. streamtrack and other functions still work ; even mrview provides
command-line output, just no graphics. I would like to try re-installing mrtrix, or at least mrview, in attempt to regain functionality.<br>
<br>
I have tried to uninstall mrtrix by navigating to the installation directory (mrtrix-0.2.12) in XQuartz, and running:<br>
<br>
./build uninstall<br>
<br>
Which produces the output:<br>
<br>
Traceback (most recent call last):<br>
File "./build", line 899, in <module><br>
if libname in os.listdir (os.path.join (symlink_prefix, 'lib')):<br>
OSError: [Errno 2] No such file or directory: '/usr/local/lib'<br>
<br>
Indeed, there is no '/usr/local/lib'. From what I can tell, all mrtrix files are located in:<br>
<br>
/usr/local/mrtrix<br>
<br>
with links residing in:<br>
<br>
/usr/local/bin<br>
<br>
Alternatively, if I run ./build -verbose then the final line before launching threads is:<br>
<br>
compiling TODO list... TODO list contains 0 items<br>
<br>
In neither case does mrview regain functionality. Could someone please advise me how I might get mrview to work again?<br>
<br>
The version of MRtrix that I am using is:<br>
<br>
mrview -version<br>
mrview 0.2.12 (revision 410)<br>
Author: J-Donald Tournier (d.tournier@brain.org.au)<br>
Copyright 2008 Brain Research Institute, Melbourne, Australia<br>
using MRtrix 0.2.12, glib 2.40.0, GSL 1.16 (build Sep 11 2014)<br>
<br>
I am using OS X 10.9.5 on a MacBook Pro with Retina display.<br>
<br>
Kind regards,<br>
Jackson<br>
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<div style="font-family:Tahoma; font-size:13px"><font face="Courier New" size="3">---------------------------<br>
<font color="000000">Dept of Phys, Anat and Gen<br>
University of Oxford<br>
Sherrington Bld, Parks Rd<br>
Oxford, OX1 3PT<br>
United Kingdom<br>
<br>
</font></font><font size="2" color="000000"><font face="Courier New" size="3">Tel: 01865 282 549</font><font size="3"><br>
</font><font face="Courier New"><font size="3">jackson.smith@dpag.ox.ac.uk<br>
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