<?xml version="1.0" encoding="UTF-8"?> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns="http://purl.org/rss/1.0/" xmlns:taxo="http://purl.org/rss/1.0/modules/taxonomy/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:syn="http://purl.org/rss/1.0/modules/syndication/" xmlns:admin="http://webns.net/mvcb/" > <channel rdf:about="http://www.nitrc.org/export/rss_sfnews.php"> <copyright>Copyright 1999-2000 VA Linux Systems, Inc.</copyright> <title>NeuroDOT News</title> <link>http://www.nitrc.org</link> <description>NeuroDOT Latest News</description> <items> <rdf:Seq> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=10118" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=10117" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=10105" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=10072" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=10018" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=10017" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=9949" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=9947" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=9936" /> <rdf:li rdf:resource="http://www.nitrc.org/forum/forum.php?forum_id=9917" /> </rdf:Seq> </items> </channel> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=10118"> <title>Eggebrecht et al. 2012 Retinotopy Data Share</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=10118</link> <description>The data from the paper, &quot;A quantitative spatial comparison of high-density diffuse optical tomography and fMRI cortical mapping,&quot; are shared here in .mat and SNIRF format. <br /> <br /> In total, 5 participants, and 10 runs are included. These data were collected in participants watching a clockwise (CW) and counter-clockwise (CCW) rotating checkerboard stimulus.<br /> <br /> See the corresponding publication for more information about this dataset:<br /> <br /> Eggebrecht AT, White BR, Ferradal SL, Chen C, Zhan Y, Snyder AZ, Dehghani H, Culver JP. A quantitative spatial comparison of high-density diffuse optical tomography and fMRI cortical mapping. Neuroimage. 2012 Jul 16;61(4):1120-8. doi: 10.1016/j.neuroimage.2012.01.124. Epub 2012 Feb 10. PMID: 22330315; PMCID: PMC3581336.</description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Wed, 26 Mar 2025 1:42:54 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=10117"> <title>Age Specific Atlases</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=10117</link> <description>Age specific atlases have been added to allow for more precise head modeling for participant populations of different ages and head sizes. Head atlases, along with their 10-20 and 10-5 coordinates and high-density head meshes have been uploaded for 6-month, 24-month, 36-month, and 60-month atlases. See readme_Age_Specific_Head_Atlases.txt for more details.<br /> <br /> If you have any questions, please contact neurodot-support@wustl.edu.<br /> </description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Fri, 07 Mar 2025 3:08:19 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=10105"> <title>NeuroDOT Newsletter: February 2025</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=10105</link> <description>We have just released the first edition of the NeuroDOT newsletter (https://oxi.wustl.edu/newsletters/). We will be posting a newsletter along with each new release of NeuroDOT approximately every 6 months. <br /> <br /> The newsletter contains release notes, highlighted features from the development team, and opportunities to contribute to NeuroDOT and attend workshops. <br /> <br /> If you have any questions or feedback about NeuroDOT, e-mail the development team, at neurodot-support@wustl.edu<br /> <br /> <br /> -The NeuroDOT Development Team</description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Fri, 14 Feb 2025 2:58:07 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=10072"> <title>NeuroDOT (v1.4) and NeuroDOT_py (v1.0.0) Releases</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=10072</link> <description>We are excited to announce the latest NeuroDOT (v1.4) &amp; NeuroDOT_py (v1.0.0) releases on GitHub and PyPi! The Matlab release features improvements to format compatibility with NIfTI, SNIRF, and LUMO, a new tutorial for participant-specific head modeling, and an interactive user-interface for rendering data on a mesh. For NeuroDOT_py, a Sphinx-based documentation site is now available in addition to the toolbox being available via PyPi. This release was made possible thanks to the efforts of the NeuroDOT Development Team and the Brain Light Lab at WashU.<br /> <br /> Become a registered NeuroDOT user to receive development updates, news about workshops, and individual help from the NeuroDOT team: https://tinyurl.com/NeuroDOT <br /> <br /> The advancements represented in this update were supported by the National Institute of Neurological Disorders and Stroke (NINDS) of The National Institutes of Health under Award Number U24NS136402. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. <br /> </description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Wed, 23 Oct 2024 9:09:53 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=10018"> <title>NeuroDOT Request for Feedback</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=10018</link> <description>NeuroDOT is actively interested in obtaining community feedback engagement on our GitHub page (https://github.com/WUSTL-ORL/NeuroDOT), the openfNIRS forum (https://openfnirs.org/community/neurodot-forum/), and here on NITRC.<br /> <br /> If you have any suggestions or questions regarding NeuroDOT, please submit your feedback through this Google Form: https://forms.gle/iEYfEZhfj99FVEs29<br /> <br /> -Emma Speh</description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Tue, 12 Mar 2024 3:44:33 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=10017"> <title>New GitHub Release: NeuroDOT v1.3</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=10017</link> <description>Latest NeuroDOT release, v1.3, is now available from GitHub.<br /> <br /> Changes since version 1.3 include:<br /> <br /> 1. Updates to Visualization functions:<br /> PlotCapData: updated source/detector spacing<br /> PlotMeshSurface: fixed facecolor parameter for case without data<br /> PlotSlices, PlotSlice, PlotSlicesTimeTrace: adjusted colorbar settings, added white background ‘bgW’ parameter<br /> Plot_RawData_Metrics_I_DQC: added params.LFO_GI to select which measurments to show in LFO plot<br /> Applycmap: compatibility with params.BG when all elements are equal to zero<br /> Adjust_brain_pos, PlotLRMeshes, PlotMeshSurface: added flat map ‘Fnodes’ case<br /> Plot_RawData_Cap_DQC, PlotCapPhysiologyPower: fixed SNR DQ metrics to compute based on the correct method<br /> DrawColoredSynchPoints: added colors to plot for up to 7 different pulses<br /> <br /> 2. Format Compatibility updates:<br /> Snirf2ndot &amp; Nirs2ndot: enforce column organization of optode position arrays<br /> LoadVolumetricData, SaveVolumetricData, Nifti_4dfp: compatibility with volumetric data in sagittal and coronal orientations, compatibility with 4D data<br /> Updated all functions using info.pairs and info.MEAS to be compatible with tables<br /> <br /> 3. Other function updates:<br /> GLM_181206: Added R squared output<br /> Added ParcelBased_fc function<br /> Added Matrix_Org3 and freezeColors functions to Visualizations<br /> <br /> 4. Tutorial &amp; Documentation updates:<br /> Light Modeling: updated all light modeling scripts to use makeAnirfaster, added tutorial for Light Modeling with a subset of measurements, and added tutorial for Light Modeling with a split-pad layout<br /> Loading Raw Data script and PowerPoint added for loading .snirf, .nirs, and .mat data<br /> Added Script_for_Viewing_Parcels for parcel-based functional-connectivity analysis<br /> Added NeuroDOT Tutorials ReadMe file<br /> Updated NeuroDOT Quick Start Guide</description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Wed, 06 Mar 2024 2:36:49 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=9949"> <title>New GitHub Release: NeuroDOT v1.2</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=9949</link> <description>Latest NeuroDOT release, v1.2, is now available from GitHub.<br /> <br /> Changes since version 1.1 include:<br /> Updated compatibility with SNIRF format<br /> Added NIRS format compatibility<br /> Added NIFTI format compatibility<br /> Updated NeuroDOT Tutorial PowerPoints and Scripts<br /> Updates to AlignMe<br /> </description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Wed, 05 Jul 2023 1:07:12 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=9947"> <title>NeuroDOT Tutorials Available to Download</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=9947</link> <description>Updated versions of each NeuroDOT tutorial PowerPoint and accompanying Matlab script can be downloaded here, or from GitHub (https://github.com/WUSTL-ORL/NeuroDOT).</description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Tue, 27 Jun 2023 2:23:28 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=9936"> <title>Schroeder et al. 2023 Language Production data to be posted</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=9936</link> <description>The paper, https://doi.org/10.1016/j.neuroimage.2023.120190 was recently published. <br /> <br /> The data used for this paper will be posted here in the SNIRF format in the next few weeks.<br /> </description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Wed, 14 Jun 2023 12:52:45 GMT</dc:date> </item> <item rdf:about="http://www.nitrc.org/forum/forum.php?forum_id=9917"> <title>Resting State Dataset released</title> <link>http://www.nitrc.org/forum/forum.php?forum_id=9917</link> <description>9 resting state datasets collected using a HD-DOT system at Washington University in St. Louis, packaged using NeuroDOT. To download, you will need to be signed in to a NITRC account.<br /> <br /> AT Eggebrecht et al., &quot;Mapping distributed brain function and networks with diffuse optical tomography,&quot; Nature Photonics, 8, 448-454 (2014).</description> <dc:subject>NeuroDOT</dc:subject> <dc:creator>Emma Speh</dc:creator> <dc:date>Wed, 08 Mar 2023 1:43:42 GMT</dc:date> </item> </rdf:RDF>