[Camino-users] voxel2image

[Philip A Cook]

Hi,

A new program lets you export voxel-order data as 3D images for visualization. Some example use cases:


Convert the components of the diffusion tensor eigen system.


  cat dt.Bdouble | dteig | voxel2image -components 12 -outputroot dteig_  -header image.nii


Extract only L1 (primary eigenvalue) using shredder


  cat dt.Bdouble | dteig | shredder 0 8 $((11*8)) | voxel2image -components 1 -outputroot dteig_L1 -header image.nii.gz


Export FA to an image


  cat dt.Bdouble | fa | voxel2image -outputroot fa -header image.nii -gzip



Phil