[Camino-users] java heap space

[Peter Neher]

Dear all,

I am trying to run image2voxel on my diffusion weighted .nii.gz file and 
get the following error:

Exception in thread "main" java.lang.OutOfMemoryError: Java heap space
     at data.ScannerOrderDataSource.init(ScannerOrderDataSource.java:169)
     at data.ScannerOrderDataSource.<init>(ScannerOrderDataSource.java:134)
     at 
data.ScannerOrderScaledDataSource.<init>(ScannerOrderScaledDataSource.java:52)
     at imaging.Nifti1Dataset.getImageDataSource(Nifti1Dataset.java:2298)
     at apps.ImageToVoxel.execute(ImageToVoxel.java:105)
     at apps.EntryPoint.main(EntryPoint.java:275)

The image has a size of about 200mb. Do you know if there is a 
workaround for this on ubuntu 12.4, java 1.7 (OpenJDK).

Best,
Peter