[Camino-users] track issue: couldn't parse arg

[Peter Neher]

The update helped. Thank you!

On 10/22/2013 04:46 PM, Philip A Cook wrote:
> I see one typo "curvthresh". The rest probably mean an older version of the code is getting called. Try
>
>     which track
>
> and if that is correct, an update and
>
>    make clean; make
>
> should solve the problem
>
> On Oct 22, 2013, at 4:45 AM, Peter Neher <p.neher at dkfz-heidelberg.de> wrote:
>
>> Hi everyone,
>>
>> I'm using the follwing command to perform some probabilistic tensor tracking:
>>
>> track -tracker euler -stepsize 0.3 -curvthresh 45 -interpolator linear -inputmodel pico -seedfile myseedfile.nii -anisthresh 0.1 -anisfile myanisfile.nii -iterations 1 -outputfile out.Bfloat < in-PDFs.Bdouble
>>
>> I get the following error:
>>
>> Oct 21, 2013 10:44:49 AM tools.CL_Initializer checkParsing
>> WARNING: WARNING: couldn't parse arg 0: '-tracker'
>> Oct 21, 2013 10:44:49 AM tools.CL_Initializer checkParsing
>> WARNING: WARNING: couldn't parse arg 1: 'euler'
>> Oct 21, 2013 10:44:49 AM tools.CL_Initializer checkParsing
>> WARNING: WARNING: couldn't parse arg 4: '-curvthresh'
>> Oct 21, 2013 10:44:49 AM tools.CL_Initializer checkParsing
>> WARNING: WARNING: couldn't parse arg 5: '45'
>> Oct 21, 2013 10:44:49 AM tools.CL_Initializer checkParsing
>> WARNING: WARNING: couldn't parse arg 6: '-interpolator'
>> Oct 21, 2013 10:44:49 AM tools.CL_Initializer checkParsing
>> WARNING: WARNING: couldn't parse arg 7: 'linear'
>>
>> Can anyone explain to me why the track command is not accepting these options?
>>
>> Cheers,
>> Peter
>> -- 
>> Dipl.-Inform. Peter Neher
>> German Cancer Research Center
>> (DKFZ, Deutsches Krebsforschungszentrum in der Helmholtz-Gemeinschaft, Stiftung des öffentlichen Rechts)
>> Division of Medical and Biological Informatics
>> Im Neuenheimer Feld 280, D-69120 Heidelberg
>>
>> Phone: 49-(0)6221-42-3552, Fax: 49-(0)6221-42-2345
>> E-Mail:
>> p.neher at dkfz-heidelberg.de, Web: www.dkfz.de
>>
>>
>> The information contained in this message may be confidential and legally protected under applicable law. The message is intended solely for the addressee(s). If you are not the intended recipient, you are hereby notified that any use, forwarding, dissemination, or reproduction of this message is strictly prohibited and may be unlawful. If you are not the intended recipient, please contact the sender by return e-mail and destroy all copies of the original message.
>>

-- 
Dipl.-Inform. Peter Neher
German Cancer Research Center
(DKFZ, Deutsches Krebsforschungszentrum in der Helmholtz-Gemeinschaft, Stiftung des öffentlichen Rechts)
Division of Medical and Biological Informatics
Im Neuenheimer Feld 280, D-69120 Heidelberg

Phone: 49-(0)6221-42-3552, Fax: 49-(0)6221-42-2345
E-Mail: p.neher at dkfz-heidelberg.de, Web: www.dkfz.de

The information contained in this message may be confidential and legally protected under applicable law. The message is intended solely for the addressee(s). If you are not the intended recipient, you are hereby notified that any use, forwarding, dissemination, or reproduction of this message is strictly prohibited and may be unlawful. If you are not the intended recipient, please contact the sender by return e-mail and destroy all copies of the original message.