[Camino-users] Problem in visualizing the FA maps

Philip A Cook cookpa at mail.med.upenn.edu
Wed Jun 11 06:20:45 PDT 2014


-datadims would do it, but these should be read from the scalar file. This might be a bug that was fixed earlier, because when I run

  pdview -inputfile eig.Bdouble -scalarfile fa.nii.gz

it works fine.

Perhaps an update to the latest Camino would solve this problem.

On Jun 11, 2014, at 8:49 AM, "Alexander, Daniel" <d.alexander at ucl.ac.uk> wrote:

> You need to add a -datadims argument.
> 
> Danny
> 
> 
> On 11 Jun 2014, at 05:05, apisheh <apisheh at yahoo.com> wrote:
> 
>> Dear Camino Users,
>> 
>> I am getting an error after using:
>> 
>> pdview -inputfile dt_eig_Bdouble_file -scalarfile fa_nii_file
>> 
>> The error is as follows:
>> 
>> Jun 10, 2014 8:48:02 PM tools.CL_Initializer initInputSpaceAndHeaderOptions
>> INFO: No definition of physical space provided, will attempt to proceed with specified data and voxel dimensions
>> Jun 10, 2014 8:48:02 PM misc.LoggedException logException
>> SEVERE: Exception in thread "main" class misc.LoggedException: Data dimensions are zero, cannot initialize image space
>> at tools.CL_Initializer.initInputSpaceAndHeaderOptions(CL_Initializer.java:2409)
>> at apps.PD_OrientationViewer.main(PD_OrientationViewer.java:740)
>> 
>> Exception in thread "main" misc.LoggedException: Data dimensions are zero, cannot initialize image space
>> at tools.CL_Initializer.initInputSpaceAndHeaderOptions(CL_Initializer.java:2409)
>> at apps.PD_OrientationViewer.main(PD_OrientationViewer.java:740)
>> 
>> 
>> Could someone help?
>> _______________________________________________
>> Camino-users mailing list
>> Camino-users at www.nitrc.org
>> http://www.nitrc.org/mailman/listinfo/camino-users
> 
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