[Camino-users] Error using sfPeaks

Parvathaneni, Prasanna prasanna.parvathaneni at vanderbilt.edu
Thu Oct 23 20:21:59 PDT 2014


Hi,



   We are trying to use the qball reconstruction with spherical harmonics order 4 as indicated in the tutorial for squirrel monkey data set whose scheme file is as attached. Its dimensions are 128X192X96.



Following are the commands



#qballmx -schemefile data1.scheme -basistype sh -order 4 > qballMatrix_data1_SH4.Bdouble
#linrecon dwi_data1.Bfloat data1.scheme  qballMatrix_data1_SH4.Bdouble -normalize -bgmask  brain_mask.nii.gz > dwi_ODF_data1_SH4.Bdouble
#sfpeaks -inputmodel sh -order 6 -numpds 3 -searchradius 0.8 -pointset 2 <  dwi_ODF_data1_SH4.Bdouble >  dwi_ODF_data1_SH4_PDs.Bdouble



Attached is the error message. Can you please assist.



Thanks,

Prasanna
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