[dmritool-discussion] Paraview help

[Jian Cheng]

Hi Nagesh,

Please check the data formats supported in paraview.
http://www.paraview.org/Wiki/ParaView/Data_formats
Paraview originally can visualize vtk files.
For the GFA map which is in nifti format, paraview can also visualize it
when you enable the AnalyzeNiftiIO plugin.
You can enable it by clicking "Tools" -> "Manage Plugins" ->
"AnalyzeNiftiIO".  Note that it supports *.nii file, but not *.nii.gz
file, and you may need to set the origin manually in paraview such that
the gfa map can be visualized in the same coordinate as the EAP profile
in vtk format.
You can also enable other useful plugins, e.g. "quadview".

Thanks for your feedback. I will add more explanation on it to the
documentation.

best,
Jian Cheng

On 03/23/2015 05:32 PM, Nagesh Adluru wrote:
> Hello Jian,
>
> Hope all is well! I am new to paraview and could you put a simple
> tutorial on how to load the EAP profile vtk files obtained from
> DMRITool in paraview with an underlay of the GFA image?
>
> The glyphs load fine in paraview but I am not able to figure out how
> to get the GFA underlay in paraview!
>
> Thanks so much for your help!
> Sincerely,
> Nagesh
>
>
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> dmritool-discussion at www.nitrc.org
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