[Mrtrix-discussion] use of -mask with streamtrack

[Ian Malone]

It was a bit of a surprise to find out; we've been able to work round it 
for what we're doing by moving towards the middle of the track until 
back inside the mask.

Thanks,
Ian

Donald Tournier wrote:
> Hi Ian,
>
> Yes, that's the expected behaviour. The track gets terminated just
> after it's left the mask. I can see that this may not always be
> desirable/expected. I could potentially change it do terminate just
> inside the mask, if that is something that people need?
> Cheers,
>
> Donald.
>
>
> On 26 February 2010 04:42, Ian Malone <ian.malone at drc.ion.ucl.ac.uk> wrote:
>   
>> Hi,
>>
>> I'm using streamtrack to do whole-brain tracking and finding that, when
>> using the -mask option, tracks terminate just beyond the mask, whereas I'd
>> expect them to finish inside the mask. Is this the expected behaviour?
>>
>> Thanks,
>> Ian Malone
>>
>> --
>> Research Associate
>> Dementia Research Centre
>> UCL
>> Institute of Neurology
>> Queen Square
>> London WC1N 3BG
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>>
>>     
>
>
>
>   

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