[Mrtrix-discussion] csdeconv: failed to converge
Markus Gschwind
markus.gschwind at gmail.com
Mon Dec 19 14:34:20 PST 2011
Dear experts,
I'd like to ask what could be the reasons whay csdeconv fails and gives an
error like
> csdeconv data.mif response.txt -mask mask.nii -grad gradtable.txt CSDm.mif
csdeconv: performing constrained spherical deconvolution... 0%csdeconv:
failed to converge
csdeconv: failed to converge
csdeconv: failed to converge
csdeconv: failed to converge
csdeconv: failed to converge
csdeconv: failed to converge
csdeconv: failed to converge
etc.
I tried with different -lmax and with different thresholded sf.mif (values
0.7, 0.6, 0.5, 0.4).
Principally the commands are correct as they worked with other brains, but
not with the one in question ( a lesioned one does it not work with brain
lesions?).
How should I proceed best in order to debug?
Thanks in advance!
Markus
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://www.nitrc.org/pipermail/mrtrix-discussion/attachments/20111219/89951dcd/attachment.html
More information about the Mrtrix-discussion
mailing list