[Mrtrix-discussion] Problem converting DICOMS with mrconvert
Todd Jolly
todd.jolly at uon.edu.au
Tue Jul 12 23:26:02 PDT 2011
Hi all,
I have been having trouble converting my DICOM files to .mif format using mrconvert. Once the DICOM series has been read, an error comes up saying that the acquisition matrix [ 128 127 ] does not fit into the DICOM mosaic. I was wondering if anyone else has come across this problem and if there is a way around it? The error is shown below.
Thank you in advance
Todd
todd-Precision-T1500:~> mrconvert /home/todd/CF002dicom/ dwi.mif
mrconvert: scanning DICOM folder "/home/todd/CF002dicom/" - ok
Select series ('q' to abort):
0 - 3 MR images 10:25:25 localizer (fl2d1) [1]
1 - 176 MR images 10:29:54 T1_Sag_iso_ASRB (tfl3d1_ns) [2]
2 - 65 MR images 10:46:33 ep2d_diff_mddw_55 slice_64 directions (ep_b3000#34) [11]
3 - 55 MR images 10:58:21 ep2d_diff_mddw_55 slice_64 directions_ADC (ep_b0_3000) [12]
4 - 55 MR images 10:58:22 ep2d_diff_mddw_55 slice_64 directions_TRACEW (ep_b3000t) [13]
5 - 55 MR images 10:58:22 ep2d_diff_mddw_55 slice_64 directions_EXP (ep_b3000) [14]
6 - 55 MR images 10:58:22 ep2d_diff_mddw_55 slice_64 directions_FA (ep_b0_3000) [15]
7 - 55 MR images 10:58:22 ep2d_diff_mddw_55 slice_64 directions_ColFA (?) [16]
? 2
mrconvert: reading DICOM series "ep2d_diff_mddw_55 slice_64 directions"... 100%
mrconvert: acquisition matrix [ 128 127 ] does not fit into DICOM mosaic [ 1024 1024 ] in image "CF002 (CF002) [MR] ep2d_diff_mddw_55 slice_64 directions"
mrconvert: error opening image "/home/todd/CF002dicom/"
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