[Mrtrix-discussion] streamtrack and whole brain tractography

[mchandra pal]

Hi,

Thank you for your kind reply. I have now included the mrtrix directory in
the system path. But when I am using the same command (streamtrack DT_STREAM
DWI.img –grad encoding.b –seed wm_t.mif –mask brain_mask.img tracks.tck),
its now showing

streamtrack: expected exactly 3 arguments (9 supplied).

What is going wrong?
-mc pal


On Mon, May 16, 2011 at 3:34 PM, Luis Morís
<luis.moris.fernandez at gmail.com>wrote:

> Hi,
>
> It seems like you've not included mrtrix directory containing the
> executables in the system path.
>
> Best,
>
> Luis.
>
>
>
> On Mon, May 16, 2011 at 11:43 AM, mchandra pal <mcpalin at gmail.com> wrote:
> > Hi.
> >
> > I was trying to do whole brain tractography using streamtrack. I am using
> > the following command:
> >
> > streamtrack DT_STREAM DWI.img –grad encoding.b –seed wm_t.mif –mask
> > brain_mask.img tracks.tck
> >
> >
> >
> > Its showing: ‘streamtrack’ is not recognized as an internal or external
> > command, operable program or batch file. I am using
> mrtrix-0.2.9-win32.exe.
> >
> > What's wrong in my command?
> >
> > - mc pal
> >
> > _______________________________________________
> > Mrtrix-discussion mailing list
> > Mrtrix-discussion at www.nitrc.org
> > http://www.nitrc.org/mailman/listinfo/mrtrix-discussion
> >
> >
>
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