[Mrtrix-discussion] Gzip patch problem

James Cole james.cole at ucl.ac.uk
Wed Aug 1 09:08:44 PDT 2012


Hi list,
I'm quite new to MRtrix and I thought it would be really useful to use 
the patch that allows Gzip .nii and .mif to be processed. However, I 
stuck with the installation and wonder if someone can help.
I downloaded the patch and untarred it:
jcole at ubuntu:~$ tar xvfj mrtrix-patch-GZ.tar-0001.bz2
build
lib/image/format/list.cpp
lib/image/format/mrtrix.cpp
lib/image/format/nifti1.cpp
lib/image/mapper.cpp
lib/image/mapper.h
lib/image/object.cpp
lib/image/object.h
sysconf/linux.py
sysconf/darwin.py
sysconf/windows.py

But then got the following error when building:
trackhd at ubuntu:~$ ./build
Traceback (most recent call last):
   File "./build", line 61, in <module>
     exec 'from sysconf.' + system.lower() + ' import *'
   File "<string>", line 1, in <module>
ImportError: No module named sysconf.linux

I tried a clean build, but gave the same error. Any thoughts on how to 
overcome this would be great.
I'm running MRtrix on an Ubuntu VMware player VM on RHEL 5.3

Thanks,
James

-- 
*James Cole PhD | Research Associate | Huntington's Disease Research 
Group | Institute of Neurology | University College London*
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