[Mrtrix-discussion] csdeconv peaks

[David Raffelt]

Hi Peter,
You can use the find_SH_peaks command. Note that you also have to supply a
set of directions as input, which are used as seeds for the peak finding.
You can generate these using the gendir command.

Note that dir2amp can be used to convert these directions to peak
amplitudes.
Cheers,
Dave




On 18 October 2012 19:06, Peter Neher <p.neher at dkfz-heidelberg.de> wrote:

> Hi all, I wondered if it is possible to directly output the fiber
> directions and not only the SH representation of the ODFs. If this is not
> possible, can anyone tell me how the SH file looks like so that I can read
> it and extract the peaks myself?
>
> Best
> Peter
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-- 
*Dr David Raffelt*
Post Doctoral Fellow

The Florey Institute of Neuroscience and Mental Health
Melbourne Brain Centre - Austin Campus
245 Burgundy Street
Heidelberg Vic 3084
Ph: +61 3 9035 7024
www.florey.edu.au
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