[Mrtrix-discussion] Fwd:

Hugh Pemberton hughpemberton1 at gmail.com
Tue May 7 19:47:28 PDT 2013


Hi mrtrix crew,

I've been using mrconvert to get my dcm files to nii for a while now However,
out the blue I started getting error messages, the first 2 lines come up
heaps of times and then it ends with the last 3 lines, i've used ****** to
block out a patients' name which is also the directory name -

mrconvert: unknown DICOM transfer syntax: "1.2.840.10008.1.2.4.70" in file
"/home/hughp/BH-high-res-mri/***********/1.2.124.113532.172.20.128.66.20120420.75751.6031595/1.3.12.2.1107.5.2.6.14402.30000012041919563025000000476/1.3.12.2.1107.5.2.6.14402.30000012041919563025000000493.dcm"
- ignored
mrconvert: scanning DICOM folder
"/home/hugh....20.128.66.20120420.75751.6031595"  - ok
mrconvert: no DICOM images found in
"/home/hughp/BH-high-res-mri/***********/1.2.124.113532.172.20.128.66.20120420.75751.6031595"
mrconvert: error opening image
"/home/hughp/BH-high-res-mri/***********/1.2.124.113532.172.20.128.66.20120420.75751.6031595"

Thanks and hope you can help,

Best,
Hugh
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