[Mrtrix-discussion] Obtaining tensor-based measures for specific fibre tract (streamline) bundles

Simon Baker simontebaker at gmail.com
Mon Oct 28 18:47:56 PDT 2013


Hi all,

Is there a command that allows us to easily obtain tensor-based measures
(e.g., mean FA) for specific fibre tract (streamline) bundles? Failing
that, is there a way to save a mask image of the streamlines so that we can
use this image to mask the FA map and calculate mean FA? What's the best
way to obtain these measures?

Thank you,

Simon

-- 

Simon Baker
PhD Candidate
Faculty of Medicine, Nursing and Health Sciences
Monash University
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