[Mrtrix-discussion] parcellated nodes image

[Robert Smith]

Hi Stella,

Could you please re-post your question over at the MRtrix3 community
discussion forum <http://community.mrtrix.org/>? That's the best place for
questions about MRtrix3; this mailing list is reserved for discussion
relating to the older 0.2 version of the MRtrix software.

Thanks
Rob


--

*Robert Smith, Ph.D*
Senior Research Officer, Imaging Division

The Florey Institute of Neuroscience and Mental Health
Melbourne Brain Centre - Austin Campus
245 Burgundy Street
Heidelberg Vic 3084
Ph: +61 3 9035 7128
Fax: +61 3 9035 7301
www.florey.edu.au

On Wed, Jun 22, 2016 at 5:24 AM, stella maris sanchez <
stellamarissanchez89 at gmail.com> wrote:

> Dear MRTrix users,
>
> I'm new using MRTrix and  I have some questions regarding the steps to
> perform an image of the parcellation nodes.
>
> First I ran the commands labelconfig and labelsgmfix as it is said in the
> tutorial (
> http://mrtrix.readthedocs.io/en/latest/tutorials/hcp_connectome.html#structural-image-processing )
> but I cant see the output images. However, I can overlay the nodes obtained
> from the generic FreeSurfer's segmentation on the b_zero image of my data
> set and I find that they a few nodes are ploted out of the brain area.
> How could I fix this issue?
>
> Cheers
>
> Stella M.
>
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