Romain<br><br>I have created a new MRtrix command for this purpose - 'filter_tracks'. It uses the same -include and -exclude options as streamtrack.<br>If you are accessing MRtrix through the Subversion repository, you should now be able to update and it will download automatically.<br>
Otherwise, you can use the file attached to this e-mail - follow <a href="http://www.nitrc.org/pipermail/mrtrix-discussion/2008-September/000009.html">these instructions</a> to add the new command into your MRtrix installation.<br>
Hope it is of some use to you!<br><br>Regards<br>Rob<br clear="all"><br>--<br><br>Robert Smith<br>Melbourne Brain Centre<br>245 Burgundy Street<br>Heidelberg VIC 3084<br>Telephone: (+61 3) 9035 7128<br>Fax: (+61 3) 9035 7301<br>
Email: <a href="mailto:r.smith@brain.org.au" target="_blank">r.smith@brain.org.au</a><br><a href="http://www.fni.edu.au" target="_blank">www.florey.edu.au</a> <a href="http://www.brain.org.au" target="_blank">www.brain.org.au</a><br>
<span style="font-size: 9pt; font-family: "Times New Roman","serif"; color: red;"></span><br>
<br><br><div class="gmail_quote">On Wed, Sep 14, 2011 at 1:55 AM, romain valabregue <span dir="ltr"><<a href="mailto:romain.valabregue@upmc.fr">romain.valabregue@upmc.fr</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;">
Hello dear all;<br>
<br>
<br>
I would like the same option as streamtrack (include exclude ...), to filter a track file generated<br>
from a white matter seed.<br>
Is there a mrtrix function (or other compatible soft) to do it ?<br>
<br>
to compute the streamtrack process for each roi of interest can become too much time consuming ...<br>
<br>
thanks for your help<br>
<br>
Romain<br>
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