[W2mhs-commits] W2MHS error upon segmentation in Matlab

Anup Bidesi anup.bidesi at sydney.edu.au
Mon May 15 20:57:00 PDT 2017


Dear W2MHS group list,

I am testing W2MHS tool using SPM12 on Linux OS ( Ubuntu) to segment WMHyperintensities.

Upon running the tool withT1 and FLAIR input scans: at Matlab command prompt see below ( see run status as below:

Done segmenting subject : SVtest_op_SV_wmh using RF Regression method

Post processing and cleaning up the segmented outputs of subject : SVtest_op_SV_wmh


and then Matlab crashes see dump file attached in the 2nd one (Abnormal termination:
Floating point exception).


I have taken SPM12 updates (r6906) and spm12_mexglx updates as well.  Wonder what could be causing this error  below:

Abnormal termination:
Floating point exception

Register State (from fault):
  RAX = 0000000000000011  RBX = 00007f57ed032680
  RCX = 0000000000000000  RDX = 0000000000000000
  RSP = 00007f59ce389290  RBP = 00007f59ce389550
  RSI = 00007f59ce389360  RDI = 00007f59ce389320

   R8 = 0000000000000000   R9 = 00007f57e92b65c0
  R10 = 0000000000000000  R11 = 00007f59dd2af672
  R12 = 00007f57e923fa20  R13 = 00000000000005bb
  R14 = 00007f59ce3893c0  R15 = 0000000000000001

  RIP = 00007f59ab93d1fe  EFL = 0000000000010246

   CS = 0033   FS = 0000   GS = 0000

Stack Trace (from fault):
[  0] 0x00007f59ab93d1fe /usr/local/MATLAB/R2014a/bin/glnxa64/libmwmathelem.so+03068414
[  1] 0x00007f59ab9411c2 /usr/local/MATLAB/R2014a/bin/glnxa64/libmwmathelem.so+03084738
[  2] 0x00007f59ab94150b /usr/local/MATLAB/R2014a/bin/glnxa64/libmwmathelem.so+03085579
[  3] 0x00007f59ab941677 /usr/local/MATLAB/R2014a/bin/glnxa64/libmwmathelem.so+03085943

and so on until

[ 97] 0x00007f59e1b0b28f   /usr/local/MATLAB/R2014a/bin/glnxa64/libmwmcr.so+00344719
[ 98] 0x00007f59e0ab9184              /lib/x86_64-linux-gnu/libpthread.so.0+00033156
[ 99] 0x00007f59e07e637d                    /lib/x86_64-linux-gnu/libc.so.6+01024893 clone+00000109

Is this is a Matlab issue or some files within SPM12 updates have to be cleared ?

Thanks & Regards,
Anup
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://www.nitrc.org/pipermail/w2mhs-commits/attachments/20170516/ef8a3ef9/attachment.html>


More information about the W2mhs-commits mailing list