Neuro Imaging Research and Analysis Laboratories (NIRAL)
Apache License 2.0
Yes
University of North Carolina at Chapel Hill (UNC-CH)
NITRC
DTI Atlas Builder
Linux
Yes
Sang Kyoon Park
This tool creates an Atlas image as an average of several DTI images that will be registered. The registration will be done in two steps :
- Affine Registration with BRAINSFit
- Non Linear Registration with GreedyAtlas
A final step will apply the transformations to the original DTI images so that the final average can be computed.
The main function writes a python script that will be executed to compute the Atlas.
By running DTIAtlasBuilder, you will need to fill in informations in a Graphical User Interface, and then compute the Atlas. You can also run the tool in command line (no GUI).
Using the GUI, you will be able to save or load a dataset file or a parameter file.
The tool needs these other tools to work, so be sure to have these installed on your computer:
- ImageMath
- ResampleDTIlogEuclidean
- CropDTI
- dtiprocess
- BRAINSFit
- GreedyAtlas
- dtiaverage
- DTI-Reg
- unu
- MriWatcher (requires glut library)
This package is also available as an extension of 3D Slicer (http://www.slicer.org)
2021-10-07
5 - Production/Stable/Mature
DTIAtlasBuilder v1.6.4e
2020-8-21
5 - Production/Stable/Mature
DTIAtlasBulder_v1.6.4-linux64
2014-3-05
5 - Production/Stable/Mature
DTIAtlasBuilder_v1.3.2_linux64_noQt
2013-6-26
5 - Production/Stable/Mature
DTIAtlasBuilder_v1.3_linux64
2013-5-01
5 - Production/Stable/Mature
DTIAtlasBuilder v1.2
DTI Atlas Builder
Diffusion Application, 5 - Production/Stable/Mature, MR, X11 Applications, Console (Text Based), End Users, Apache License 2.0, Linux
http://www.nitrc.org/projects/dtiatlasbuilder/
sangkyoon_park@med.unc.edu