sdm-help-list > HELP - SDM threshold error
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Jan 16, 2025  11:01 AM | Franky Yu
HELP - SDM threshold error

Hello guys,


While I was lauching the threshold analysis, it showed warning that some files were not found. I have noticed that some ppl have run into the same issues on this platform but I still cannot find the solution.


If anyone knows how to deal with this, pls comment and let me know thank you so much! :)


Here is the system message:


Launching Threshold...


_________________________________________________________ Launching Threshold...


Launched: sdm threshold /Users/frankyyu/Documents/ENIGMA/SDM/Example_SDM_analysis_Si_et_al/OneDrive_1_06-02-2024 2/analysis_MyTest/corrp_tfce,/Users/frankyyu/Documents/ENIGMA/SDM/Example_SDM_analysis_Si_et_al/OneDrive_1_06-02-2024 2/analysis_MyTest/MyTest_z,0.025,1


Running imgcalc: (imgcalc) [foobin] = [foothr] ? 1 : 0
WARNING: File 'foothr' was not found or is not a NIfTI file (unknown extension).


Running imgcalc: (imgcalc) [2/analysis_MyTest/MyTest_z] = [foobin] * [/Users/frankyyu/Documents/ENIGMA/SDM/Example_SDM_analysis_Si_et_al/OneDrive_1_06-02-2024]
WARNING: File 'foobin' was not found or is not a NIfTI file (unknown extension).


Running imgcalc: (imgcalc) [/Users/frankyyu/Documents/ENIGMA/SDM/Example_SDM_analysis_Si_et_al/OneDrive_1_06-02-2024] = clusters from [foomul] with size >= 1
WARNING: File 'foomul' was not found or is not a NIfTI file (unknown extension).


Running imgcalc: (imgcalc) [foobin] = [foothr] ? 1 : 0
WARNING: File 'foothr' was not found or is not a NIfTI file (unknown extension).


Running imgcalc: (imgcalc) [2/analysis_MyTest/MyTest_z] = [foobin] * [/Users/frankyyu/Documents/ENIGMA/SDM/Example_SDM_analysis_Si_et_al/OneDrive_1_06-02-2024]
WARNING: File 'foobin' was not found or is not a NIfTI file (unknown extension).


Running imgcalc: (imgcalc) [foomul2] = [foomul] * -1
WARNING: File 'foomul' was not found or is not a NIfTI file (
WARNING: File 'foothr' was not found or is not a NIfTI file (unknown extension).
WARNING: File 'foobin' was not found or is not a NIfTI file (unknown extension).
WARNING: File 'foomul' was not found or is not a NIfTI file (unknown extension).
WARNING: File 'foothr' was not found or is not a NIfTI file (unknown extension).
WARNING: File 'foobin' was not found or is not a NIfTI file (unknown extension).
WARNING: File 'foomul' was not found or is not a NIfTI file (unknown extension).
WARNING: File 'foomul2' was not found or is not a NIfTI file (unknown extension). unknown extension).


Running imgcalc: (imgcalc) [/Users/frankyyu/Documents/ENIGMA/SDM/Example_SDM_analysis_Si_et_al/OneDrive_1_06-02-2024] = clusters from [foomul2] with size >= 1
WARNING: File 'foomul2' was not found or is not a NIfTI file (unknown extension).


Launching webbrowser


Launching MRICron


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