Hello,

Really enjoying this software thus far. I am trying to plot statistical maps onto subcortical structures. However, when I am unable to load the CIT168.mz3 mesh, as well as some others:

CIT168.mz3
AICHAhr.lh.mz3
surficetemp.mz3
lh.pial
boggle.lh.annot

I'm not sure if these meshes are included in Surfice or have to be obtained elsewhere. Any help is appreciated regarding how I can access and load these meshes.

Thanks,
Matt

These should all come with your Surfice download. For example, you should see AICHAhr.lh.mz3' displayed when you choose the Scripting/Templates/create_atlas menu item. If this is not the case, can you tell me where you downloaded Surfice from (NITRC or Github) and the version string that is displayed when you choose about. It should look something like this and provides details about the software version, compilation and local computer capabilities:

Surf Ice 1.0.20211212j 64-bit ARM Cocoa LLVM StaticPythonBridge
hw.model: MacBookAir10,1
Version 11.7 (Build 20G817)
http://www.mricro.com :: BSD 2-Clause License (opensource.org/licenses/BSD-2-Clause)
PythonBridge
Scale 89.0852
Origin -34.7638x-18.0267x14.7582
Mesh Vertices 65149 Faces 129506 Colors 65149 Indexed Atlas
-71.0021..1.4745 -107.1119..71.0584 -51.0013..80.5178
Track Vertices 0 Faces 0 Count 0
Node Vertices 0 Faces 0
GPU Apple :: OpenGL 4.1 Metal - 71.7.1 :: GLSL 4.10

When I load the templates, the above meshes are unable to load. I downloaded from NITRC. Here us the version string:

Surf Ice 1.0.20211006+ 64-bit x86-64 Cocoa LLVM StaticPythonBridge
hw.model: iMac20,1
Version 12.6 (Build 21G115)
http://www.mricro.com :: BSD 2-Clause License (opensource.org/licenses/BSD-2-Clause)
PythonBridge
Scale 0.0000
Origin 0.0000x0.0000x0.0000
Mesh Vertices 0 Faces 0 Colors 0
Track Vertices 0 Faces 0 Count 0
Node Vertices 0 Faces 0
GPU ATI Technologies Inc. :: OpenGL 4.1 ATI-4.8.101 :: GLSL 4.10

Curioous, I wonder if the MacOS path randomization designed to prevent maiicious software is impacting you. Can you drag and drop the file named 'AICHAhr.lh.mz3' from your ~/Applications/Surfice/atlas folder onto Surfice. Once this is done once, Surfice should be able to work out the path when the scripts are run in the future.

Perfect! It's working now. Thank you.