help > Surface Rendering
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Apr 26, 2023 07:04 PM | johezz
Surface Rendering
Hi there!
Thank you for managing this forum.
I am wondering what template I should load to get a surface map like the one attached in the screenshot. This is the image displayed in my finder before I load the mni152_2009.curv file into Surfice. The goal is to get a surface rendering just like the screenshot.
I would appreciate any help. Thank you!
Thank you for managing this forum.
I am wondering what template I should load to get a surface map like the one attached in the screenshot. This is the image displayed in my finder before I load the mni152_2009.curv file into Surfice. The goal is to get a surface rendering just like the screenshot.
I would appreciate any help. Thank you!
Apr 27, 2023 12:04 PM | Chris Rorden
RE: Surface Rendering
If you choose Scripting/Templates/fmri_mesh menu item you get
something that is close. You would want to use the 'Toon' cel
shader and set the mesh color to green. With these changes the
script becomes:
import gl
gl.resetdefaults()
gl.meshload('BrainMesh_ICBM152.rh.mz3')
gl.overlayload('motor_4t95mesh.rh.mz3')
gl.overlaycolorname(1, 'red')
gl.shaderxray(1.0, 0.3)
gl.azimuthelevation(110, 15)
gl.meshcurv()
gl.meshcolor(128,192,128)
gl.shadername('Toon')
import gl
gl.resetdefaults()
gl.meshload('BrainMesh_ICBM152.rh.mz3')
gl.overlayload('motor_4t95mesh.rh.mz3')
gl.overlaycolorname(1, 'red')
gl.shaderxray(1.0, 0.3)
gl.azimuthelevation(110, 15)
gl.meshcurv()
gl.meshcolor(128,192,128)
gl.shadername('Toon')
May 1, 2023 06:05 PM | johezz
RE: Surface Rendering
Great, thanks Chris!
Is there any way to extent this mesh to the full brain? Currently, I only see the right side and a midsection view from the left (attached). Is it possible to see both the right side, midsection and also the left side (e.g. left temporal pole) as well?
Is there any way to extent this mesh to the full brain? Currently, I only see the right side and a midsection view from the left (attached). Is it possible to see both the right side, midsection and also the left side (e.g. left temporal pole) as well?
May 1, 2023 06:05 PM | Chris Rorden
RE: Surface Rendering
Use scripting/templates/help to see the available commands. You can
load both hemispheres like this:
import gl
gl.resetdefaults()
gl.meshloadbilateral('BrainMesh_ICBM152.rh.mz3')
gl.overlayload('motor_4t95mesh.rh.mz3')
gl.overlaycolorname(1, 'red')
gl.shaderxray(1.0, 0.3)
gl.azimuthelevation(110, 15)
gl.meshcurv()
import gl
gl.resetdefaults()
gl.meshloadbilateral('BrainMesh_ICBM152.rh.mz3')
gl.overlayload('motor_4t95mesh.rh.mz3')
gl.overlaycolorname(1, 'red')
gl.shaderxray(1.0, 0.3)
gl.azimuthelevation(110, 15)
gl.meshcurv()