general > Using density counting data generated by Ilatsik as an input for Nutil
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Aug 20, 2021  01:08 PM | Anh Nguyen - Champalimaud centre for the Unknown
Using density counting data generated by Ilatsik as an input for Nutil
Hi,

I'm trying out Nutil and firstly, thank you very much for this amazing tool.
The Nutil document says that it accepts segmentation data as input. I'm wondering if I can use Density counting data from Ilatsik as input to Nutil? I have the impression that they are not segmentation data, but I want to ask to make sure.
Best,

Anh.
Aug 20, 2021  03:08 PM | Sharon Christine Yates - University of Oslo
RE: Using density counting data generated by Ilatsik as an input for Nutil
Hi Anh,

No it's not possible to use the density counting data with Nutil. Nutil is compatible with segmentations generated with the Pixel Classification workflow in ilastik or the Pixel and Object classification workflows. They are RGB images in PNG format. For instructions see https://nutil.readthedocs.io/en/latest/
Aug 23, 2021  08:08 AM | Anh Nguyen - Champalimaud centre for the Unknown
RE: Using density counting data generated by Ilatsik as an input for Nutil
Hi,

Thanks a lot for the reply!

Anh.