NeuroStars is an additional question and answer forum for neuroscience researchers hosted by the International Neuroinformatics Coordinating Facility (INCF). We provide a read-only view of the recent activity for indicated “tag” at NeuroStars. When clicking on a forum entry, we redirect you to that posting at NeuroStars. At NeuroStars, users can reply to existing threads and start new topics. A separate NeuroStars account is needed in order to add forum content.
Neurostars feed content for Tags: datalad, freesurfer
TopicAuthorPostsRepliesLast Post
Errors when running cubids apply with datalad10Jul 01, 2025 @11:38:48
Accidental execution of git annex uninit in superdataset10Jun 24, 2025 @15:41:52
Unable to get HBN Dataset from RBC on Linux ServerMatt Cieslak20Feb 11, 2025 @15:22:19
Datalad branches vs. subsets for experimentsMatt Cieslak10Dec 10, 2024 @22:21:18
How to update metadata with datatab?Alexis Praga96Dec 09, 2024 @10:11:25
Datalad was tested in QTS?Alexis Praga10Nov 26, 2024 @10:31:36
Adding more datasets to FairlyBig resultsDiego 20Oct 22, 2024 @02:07:02
Cloning HBN CPAC dataYaroslav Halchenko106Oct 04, 2024 @00:54:45
Procedurally Getting (and Dropping) Data during Datalad RunYaroslav Halchenko20Aug 14, 2024 @19:15:58
How to create a versioned subset of several datalad datasetsAlexandre Pron86Jun 17, 2024 @13:11:14
Datalad not downloading to NFS mount (“notneeded”). Works on local dirYaroslav Halchenko96Jun 05, 2024 @16:20:56
Datalad push –to ria-storage not workingMichał Szczepanik20Jun 05, 2024 @13:05:16
Continous BIDS multi-site protocol complianceBasile136May 21, 2024 @19:00:04
In datalad, how to attach a url to an existing output file?Yaroslav Halchenko41May 08, 2024 @16:36:39
Datalad update says update(ok) but does nothingMichael Hanke20May 07, 2024 @18:01:23
Git annex whereis knows the url to a file, but datalad get cannot find itMichael Hanke20May 07, 2024 @00:30:11
Datalad: Downloading symlinks dataChris Markiewicz1914Mar 06, 2024 @19:37:23
Best approach to dealing with institution-shared datasets on a constrained file systemYaroslav Halchenko20Jan 29, 2024 @15:57:37
Datalad edit OpenNeuro datasetChris Markiewicz42Nov 30, 2023 @21:09:36
How does the –jobs parameter affect `datalad save`?Chris Markiewicz20Oct 11, 2023 @11:59:33
Distribits 2024: Conference on distributed data management technologiesChris Markiewicz10Oct 09, 2023 @14:35:04
Permission issues with datalad remove and datalad dropLukas Van Oudenhove2013Sep 06, 2023 @07:53:18
Parallel universes and DataladYaroslav Halchenko74Aug 07, 2023 @13:36:09
How to set clone locations to local only on HPC51Jul 26, 2023 @09:40:52
Connecting DataLad to local S3 Object Store (MinIO)Pranav Kumar Mishra2611Jul 19, 2023 @04:24:06
How do I add URLs to add that require authentication using datalad addurls?Michał Szczepanik20Jul 18, 2023 @19:30:54
Issue getting data with datalad on HPCRemi Gau41Jun 08, 2023 @17:04:39
Fail to download ds003007 derivatives from openneuro using aws or dataladYaroslav Halchenko63Jun 02, 2023 @12:46:39
GitHub + Datalad RIA as common data sourceTill41May 16, 2023 @18:08:24
Moving superdatasets to a new locationLukas Van Oudenhove50May 15, 2023 @13:10:48
Confusion about SynthMorph integration in recon-all for FreeSurfer 8.0.0Lukas Van Oudenhove10Jul 01, 2025 @10:58:23
Freeview quit unexpectedlyStefano Lanterna188Jun 27, 2025 @10:00:22
Freesurfer 8 documentationStefano Lanterna10Jun 10, 2025 @21:28:43
FreeSurfer Virtual Course June 9, 10, and 12Stefano Lanterna10May 29, 2025 @16:41:38
Resolving FreeSurfer Errors on macOS While Processing HCP DataSteven Lee Meisler20May 25, 2025 @16:33:46
Freeview crashes on open after installationSteven Lee Meisler1411May 21, 2025 @15:44:28
Is it possible to get a T1w per sessions when using fMRIPrep?Steven Lee Meisler20May 06, 2025 @01:12:40
Freesurfer failed on longitudinal timepoint?Dorian P75Apr 30, 2025 @19:25:15
Freesurfer question: I ran the same pipeline using two input PET images — one that was left-right mirrored and one that was notDorian P10Apr 30, 2025 @09:39:57
fMRIPrep 25.0.0 and autorecon-2 and 3Divesh Thaploo119Apr 28, 2025 @18:23:01
Brainmasks created incorrectly during 7T preprocessingAntonia Franaszek-Traczewska53Apr 24, 2025 @15:34:41
Help with freesurfer’s mri_label2volGargi 62Apr 06, 2025 @16:47:13
Freesurfer aseg ROIs’ centroid coordinatesJohannes Wiesner108Mar 18, 2025 @17:26:23
Use of defaced T1w in fMRIprep: how to organise data?Steven Lee Meisler42Mar 14, 2025 @01:57:38
Optimising Freesurfer parcelation in volume space (mri_label2vol)83Mar 13, 2025 @19:40:57
Issue Projecting Volumetric ROI nii to Surface with Some Subjects’ Midthickness Surfaces10Mar 11, 2025 @18:31:49
Fixing Left-Right ReversalJo Etzel20Mar 05, 2025 @16:14:12
Sulcal Depth from FreeSurfer Output31Mar 03, 2025 @17:14:56
Does fMRIprep work with precomputed freesurfer 8 output?10Feb 26, 2025 @06:26:44
Symmetric vertex correspondence20Feb 13, 2025 @00:27:04
Qsiprep “freesurfer data is required to make HSVS 5tt image”… does anyone know what these “files” that are needed are?Irina1512Feb 07, 2025 @03:28:42
Opening freeview using containerChris Markiewicz40Feb 06, 2025 @19:32:05
Reproducing FreeSurfer Cortical Thickness Estimation AlgorithmChris Markiewicz10Feb 05, 2025 @05:56:40
How to insert the hippocampal subfield segmentation image into Freesurfer’s default parcellation image20Jan 29, 2025 @23:15:48
FreeSurfer recon-all command not foundSai Krishna Chaitanya Annavazala74Jan 29, 2025 @19:49:05
Fmriprep mritotal failedJohannes Wiesner85Jan 16, 2025 @13:47:40
Understanding FreeSurfer’s Cortical Thickness Measurement ProcessRiot Creator74Jan 15, 2025 @02:08:43
How to Plot Surface with ROI Boundaries Using Harvard-Oxford Brain Atlas?Bertrand Thirion20Jan 05, 2025 @21:02:19
FreeSurfer outside fmriprep: longitudinal?Yanbin Niu1212Dec 14, 2024 @02:59:27
PALM with Freesurfer surface dataYanbin Niu10Dec 12, 2024 @11:47:09
NeuroStars is an additional question and answer forum for neuroscience researchers hosted by the International Neuroinformatics Coordinating Facility (INCF). We provide a read-only view of the recent activity for indicated “tag” at NeuroStars. When clicking on a forum entry, we redirect you to that posting at NeuroStars. At NeuroStars, users can reply to existing threads and start new topics. A separate NeuroStars account is needed in order to add forum content.