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help > procstreamlines problem - too many seeds
Jul 22, 2014 03:07 PM | Joanna Goc - LMU
procstreamlines problem - too many seeds
Hi,
So I have converted a trk file (around 889419 tracts) into Bfloat using camino-trackvis and am trying to create connectivity matrix which ends up with a lot of 0s in the excel file and in the matrix itself, which I know is not correct especially since I have also done tracking with camino and then repeated the connectivity matrix.
When I run procstreamliens on the converted trk file (so the new Bfloat) somehow it sees 1334780 seeds which is substantially more than it's supposed to be and so the processing stops and there is a communication:
Processing ROI 1 of 1
Processing seed 889419 of 1334780Jul 22, 2014 5:10:39 PM misc.LoggedException logException
SEVERE: Exception in thread "main" class misc.LoggedException: No more tracts in input after processing seed 889419 of 1334780
at apps.ProcessStreamlines.execute(ProcessStreamlines.java:1060)
at apps.EntryPoint.main(EntryPoint.java:284)
Exception in thread "main" misc.LoggedException: No more tracts in input after processing seed 889419 of 1334780
at apps.ProcessStreamlines.execute(ProcessStreamlines.java:1060)
at apps.EntryPoint.main(EntryPoint.java:284)
Does anyone have any idea why this happens and how do I fix this?
Thanks for the help in advance,
Joanna
So I have converted a trk file (around 889419 tracts) into Bfloat using camino-trackvis and am trying to create connectivity matrix which ends up with a lot of 0s in the excel file and in the matrix itself, which I know is not correct especially since I have also done tracking with camino and then repeated the connectivity matrix.
When I run procstreamliens on the converted trk file (so the new Bfloat) somehow it sees 1334780 seeds which is substantially more than it's supposed to be and so the processing stops and there is a communication:
Processing ROI 1 of 1
Processing seed 889419 of 1334780Jul 22, 2014 5:10:39 PM misc.LoggedException logException
SEVERE: Exception in thread "main" class misc.LoggedException: No more tracts in input after processing seed 889419 of 1334780
at apps.ProcessStreamlines.execute(ProcessStreamlines.java:1060)
at apps.EntryPoint.main(EntryPoint.java:284)
Exception in thread "main" misc.LoggedException: No more tracts in input after processing seed 889419 of 1334780
at apps.ProcessStreamlines.execute(ProcessStreamlines.java:1060)
at apps.EntryPoint.main(EntryPoint.java:284)
Does anyone have any idea why this happens and how do I fix this?
Thanks for the help in advance,
Joanna