processing-scripts
processing-scripts > RE: 3dresample--RPI
May 30, 2014 08:05 AM | Maarten Mennes
RE: 3dresample--RPI
Hello,
yes, all released data has been reoriented to RPI. Reorienting it again as per the script will not change anything. The script has the reorienting step so it will also work on data that was not downloaded through INDI or the fcon1000 (i.e., data you collected locally).
You can check the orientation with 3dinfo of fslhd or by opening it in fslview and checking the labels. However, I suggest to always check with your local MR physicist what orientation the data is in when it comes out of the scanner.
Maarten
yes, all released data has been reoriented to RPI. Reorienting it again as per the script will not change anything. The script has the reorienting step so it will also work on data that was not downloaded through INDI or the fcon1000 (i.e., data you collected locally).
You can check the orientation with 3dinfo of fslhd or by opening it in fslview and checking the labels. However, I suggest to always check with your local MR physicist what orientation the data is in when it comes out of the scanner.
Maarten
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Title | Author | Date |
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xiufen zhang | May 24, 2014 | |
Maarten Mennes | May 30, 2014 | |