Hello,

I successfully - assuming so - installed FSL 5.0 from the Debian repository. In the ./profile I set the path as explained on the Neurodebian webpage:

# set PATH for FSL 5.0
FSLDIR=/usr/share/fsl/5.0
. ${FSLDIR}/etc/fslconf/fsl.sh
PATH=${FSLDIR}/bin:${PATH}
export FSLDIR PATH

As a next step I wanted to install FRIEND for FSL, however, apparently the "buildAllLinux.sh" file which should compile the binaries into the application folder looks for the following paths:

$FSLDIR/extras/src/...
$FSLDIR/src/...

which are not present in my fsl directory. Present are the following folders:bin, data, doc, etc and tcl

I know that this is a rather specific question but I wanted to give it a try here as I don't know where to search for an answer anymore. I appreciate any tips and help.

Best,
Marcel