open-discussion
open-discussion > RE: MRS coordinate transform and segmentation
Apr 18, 2017 09:04 PM | Emily Belleau
RE: MRS coordinate transform and segmentation
Hello Bartosz,
Your rda2nifti script is fantastic thanks for sharing! Do you know how one might derive the MRS voxel mask from the dicom files instead of the .rda files? I have collected MRS data from a Siemens Trim Trio as well. Due to the multi-TE acquisition, we went through the spectro-DICOM option which outputs the whole TE-stepped series in Siemens MRS DICOM format rather than rda format. Is there any way to extract this same information that the matlab script calls for via the dicoms?
I would appreciate any guidance you can offer!
Thanks,
Emily
Your rda2nifti script is fantastic thanks for sharing! Do you know how one might derive the MRS voxel mask from the dicom files instead of the .rda files? I have collected MRS data from a Siemens Trim Trio as well. Due to the multi-TE acquisition, we went through the spectro-DICOM option which outputs the whole TE-stepped series in Siemens MRS DICOM format rather than rda format. Is there any way to extract this same information that the matlab script calls for via the dicoms?
I would appreciate any guidance you can offer!
Thanks,
Emily
Threaded View
Title | Author | Date |
---|---|---|
Peter Goodin | Mar 29, 2013 | |
Bartosz Kossowski | Nov 27, 2015 | |
Emily Belleau | Apr 18, 2017 | |
osman tokd | Dec 5, 2015 | |
Peter Goodin | Jul 24, 2014 | |
Toby T | Oct 17, 2014 | |
gary hards | Jun 17, 2014 | |
jess en | May 18, 2014 | |
Nick Tustison | Apr 1, 2013 | |
Peter Goodin | Apr 1, 2013 | |
Nick Tustison | Apr 1, 2013 | |
Peter Goodin | Apr 1, 2013 | |
Vincent Magnotta | Apr 1, 2014 | |
Laurent barantin | Apr 1, 2014 | |
Nick Tustison | Apr 1, 2014 | |
Laurent barantin | Apr 1, 2014 | |
CAROLE GUILLEVIN | Sep 27, 2016 | |
Yuzheng Hu | Apr 1, 2014 | |
Nick Tustison | Apr 1, 2014 | |