Hi,

Do you have any suggestions for using DTIPrep on HCP datasets? A typical diffusion dataset for a subject includes multiple pairs of AP-PA full sequences, along with sbrefs and fieldmap acquisition. The HCP processing pipeline usually includes averaging the AP-PA pairs together while denoising, and I imagine this would be thrown off if one removes slices with DTIPrep beforehand. Happy to provide more info as needed. Any guidance on this?

Thanks,
Steven