Hi everyone,

I am writing a fMRI processing pipeline in Python and I am using wrapper functions to call various MATLAB scripts (including SPM). Problem I am currently having is that I want to execute ART for outlier detection, but I CANNOT use GUI within my system.

How can I turn off the GUI option and just perform the MAIN PROCESS (i.e., outlier detection) where I can get: Regressor Files and Analysis Mask which ART should output for each subject?

I've attached the art.m script I am currently using (which relies on GUI)

I appreciate ANY help! Thanks!