Hi! I'm working with the QUINT pipeline, and when I run the pipeline, I downsize my images using NUTIL, then do the ABA alignment on the downsized images, and then run the quantification using NUTIL. For this final step, I'd like to use the full-sized mask images rather than the downsized ones for better accuracy, but my json file from the registration was generated using the downsized masks. Will this be an issue in any way? Does anyone have experience doing this?
Thank you!