Hi,

Thanks for the wonderful software. I was trying to use CortThick to get cortical thickness statistics across different regions using freesurfer parcellation and fsl's FAST segmentation but it quit with the following error message:

binod@soave:~$ CortThickCLP /data/export/home/binod/ARCTIC_trial_50294/used_wmparc_asMASK/cortThick_results --inputSeg /data/export/home/binod/ARCTIC_trial_50294/used_wmparc_asMASK/fast_seg.nii --par /data/export/home/binod/ARCTIC_trial_50294/used_wmparc_asMASK/aparc_a2009s_inT1.nii --WMLabel 3 --GMLabel 2 
WhiteMatterInput: 
GreyMatterInput: 
WhiteMatterLabel: 3
GreyMatterLabel: 2
SegmentationInput: /data/export/home/binod/ARCTIC_trial_50294/used_wmparc_asMASK/fast_seg.nii
Output: /data/export/home/binod/ARCTIC_trial_50294/used_wmparc_asMASK/cortThick_results
WhiteMatterComponentOption: 0
GreyMatterComponentOption: 0
VTKOption: 0
ParcellationOption: /data/export/home/binod/ARCTIC_trial_50294/used_wmparc_asMASK/aparc_a2009s_inT1.nii
ParcellationOption: /data/export/home/binod/ARCTIC_trial_50294/used_wmparc_asMASK/aparc_a2009s_inT1.nii
ParFile: 1
SaveWM: 
SaveGM: 
BoundaryVsInteriorOption: 0
SegImageSize: 74
SegImage: 1

WhiteMatterImageSize: 0
GreyMatterImageSize: 0
SepImage: 0
 Boundary Computation 
 Danielsson Map 
 Calcul Distance
 Hash Map 
 Fin HashMap 
 delete point
Segmentation fault


Can someone please explain what am I doing wrong,please? Thanks in advance.

binod