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Notes:
- Inputs/Outputs:
- Add new input mask: exclusion area (e.g brainstem,
cerebellum)
- Add new option: output data subdirectory (default:
GAMBIT)
- Bias Field correction:
- Rename suffix to 'bias' (instead of
'biasfieldcorrected')
- Post-process label image
- Combine AbsoluteWMMask and LatVent
- Create label map for cortical thickness
measurement via LabelSegPostProcess (use of input masks,
filling...)
- Surface area:
- Compute direct surface area measurements,
without the need of a parcellation map...
- Implement interpolated surface area on
corresponding meshes
- QC: Implement mean surface area
- Particle correspondence:
- Update ParticleCorrespondencePostProcessing
parameter file with newer version of
ParticleCorrespondencePostProcessing tool
- Particle correspondence PostProcessing QC:
- Create QC parameter file (to be run with
ShapeWorksShop for particle correspondence QC)
- Mean corresponding attribute computation
(CortThick/SulcalDepth/Surface area)
- MRML scene creation:
- create attributes within non-corresponding VTK
meshes (MeshMath -KWMtoPolyData)
- remove random coloring for meshes
- Applications:
- SegPostProcessCLP has been updated (Filling
update)
- ShapeWorksRun: Attribute scalars bug has been
fixed
- add MeshCortThick: used for cortical thickness
attribute computation
- add LabelSegPostProcess
Changes:
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