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Notes:
GingerALE 2.0 has a new algorithm with requires subject information. Besides the new algorithm, GingerALE 2.0 includes MNI support, improved data history, command line support and bug fixes.
Changes:
New Algorithm:
* Requires subject data within foci text (Supported by Sleuth 1.2)
* Temporarily saves activation maps to disk (<1MB per experiment)
* Subtraction foci are not supported in this release
* ALE and P Value images can not be loaded from file in this release
MNI Support:
* Supports MNI reference space throughout, chosen in the preferences
* Shows chosen coordinate system in Foci section
* Automatically changes reference space to match the reference space of the foci data (if using Sleuth 1.2)
* Supports MNI in coordinates by transforming them, then using talairach labels
Other New Features:
* Improved Data History with more information (mask details, experiment tables, minimum recommended cluster volume) and added the ability to save it at any time (File → Save Data History)
* Simplified the interface into 3 steps: ALE, Thresholding & Cluster Analysis
* Improved command-line support with standardized arguments & error messages, and several more options (output file, mask size, reference space)
Bug Fixes:
* Changed clustering algorithm to better match FSL & Mango (Thanks Matt C.)
* Fixed NIfTI extension data to add FSL support (Thanks Matt W.)
* Fixed a cluster analysis bug to handle 0 clusters (Thanks Synge)
* Fixed a Foci Image bug that caused the image not to be saved
* Fixed data history bugs: mask dimensions and % of voxels greater than pN now reported correctly
* Supports Spaces in Mac OS X
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