[Camino-users] ODF format

[José Luis Martín Egido]

Yep, I forgot to add the website, it was exactly this one, but the format
of the output for the "linrecon" function is not included, so the format of
the ODF is not as much detailed as the rest of functions.

I'll check the voxel2image in any case, thanks!


2013/4/19 Philip A Cook <cookpa at mail.med.upenn.edu>

> Here's some more information
>
> http://cmic.cs.ucl.ac.uk/camino//index.php?n=Main.Fileformats
>
> You can use voxel2image to convert multi-componennt data to a series of 3D
> nii images for visualization.
>
>
>
> On Apr 19, 2013, at 9:58 AM, José Luis Martín Egido wrote:
>
> Hello colleagues,
>
> I have used these commands to generate the spherical harmonic ODF
> representation.
>
> qballmx -schemefile pigBrain.scheme -basistype sh -order 4 >
> qballMatrix.Bdouble
>
> linrecon pigBrain.Bfloat pigBrain.scheme qballMatrix.Bdouble -normalize
> -bgthresh 200 > pigBrainODFs.Bdouble
>
> Apparently, the results are alright, but since I want to convert this "pigBrainODFs.Bdouble"
> to nifti, I'd like to know what is the format of the generated ODF.
>
> I checked this website, and I'm looking for similar explanations as this
> website has for other formats.
>
> Any kind of help will be welcome.
>
> Best regards,
>
> José Luis
>
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>


-- 

José Luis Martín Egido
Laboratorio de Imagen Médica.
Unidad de Medicina y Cirugía Experimental.
Hospital General Universitario Gregorio Marañón
Dr Esquerdo 46, 28007 Madrid, Spain
Tlf.: 91 426 50 67 - Ext. 17
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