[Camino-users] tractography on a normalized tensor data

Binod Thapa Chhetry bt2318 at columbia.edu
Fri Aug 9 15:23:29 PDT 2013


Hi all,

I want to run tractography with my tensors in a standard MNI space. I have
normalized the fitted single tensor data(from dtifit) using DTI-TK. Now, I
could do nifti2camino and bring my normalized tensor data(from DTI-TK) in
nii to camino format.

I was hoping if somebody could tell me what would be the best/appropriate
input model for probabilistic tractography. Since, I have normalized
tensors, I was thinking of PICO but then I only have schemefile for the
tensor in native space, not in MNI. Can I use the same schemefile?Or,
should I use a different model altogether, and how?

Hope this is not too confusing.

Looking forward for a reply.
Binod
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