[Camino-users] Connectivity Mapping with Freesurfer labels

[Philip A Cook]

Hi,

conmat is similar to the conmap command, but I never successfully ran conmap so I'm not sure if it would produce identical results. I have attempted to document how conmat works in its manual page. It handles non-sequential labels.



On Aug 7, 2013, at 5:02 AM, Alexander Lebedev wrote:

> Dear Camino users and developers,
> 
> I've just started using Camino and currently trying to follow the steps of this tutorial (http://web4.cs.ucl.ac.uk/research/medic/camino/pmwiki/pmwiki.php?n=Tutorials.ConnectivityMapping), implementing connectivity mapping using Freesurfer parcellations. Everything seems to be relatively straightforward except for a couple of things..
> 
> - I assume that new conmat command is equivalent to conmap from this tutorial.. Am I right?
> - I also found that there were some issues with FS parcellations in Camino (http://www.nitrc.org/pipermail/camino-users/2011-October/000020.html) Are they fixed in the last version of the software?
> 
> Running on:
> OS X 10.8.3 (64-bit)
> Camino version: r1221
> 
> 
> Thank you in advance!
> ===
> Best Regards,
> Alex Lebedev
> 
> 
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