[Camino-users] Fwd: atlas problem

[Philip A Cook]

Please refrain from repeatedly emailing the list with the same thing. I will respond to your questions when I can. 

On May 29, 2013, at 7:09 AM, lujiao luo wrote:

> 
> Dear Cook, 
> Thanks so much for your help, but I still feel confused by these problems.
> 
> 1. When using flag procstreamlines I need to have a target file which also contain label information. I really couldn't figure out what a target file is? Is it just like an roi, or something else?
> 
> 2. How to generate an atlas which also contains label information? I found that the roi file and its corresponding label are separated into two files, how can I combine them together to obtain an atlas? Do I also need something else?
> 
> 3. I used two distinct seed files (from same participant) to do fiber tracking, how can I converge the two .Bfloat together, and use the combined file to do cortical segmentation? Does the -conmat flag serve this function?
> 
> Thanks again!
> 
> Best regards,
> Yours Lulu
> 
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