[Camino-users] how to read a camino .Bfloat file in NODDI toolbox

[stefania oliviero]

Hi again Matt,s

Unfortunately, my problem in unsolved.

I obtained my file .bfloat from Monte-Carlo diffusion simulation, so it has no header file, required from command voxel2image.

I try to create an header file by using the follow command

analyzeheader -datadims 10 1 1 -voxeldims 1.7 1.7 1.7 -datatype double > ND_p00_g70.hdr

and the output ND_p00_g70.hdr is done, but he doesn't contain the information of the signal ...

When i run the command

voxel2image -inputfile ND_p00_g70_NOISE.Bfloat -outputroot nifti_ -header  ND_p00_g70.hdr

this message appears

Exception in thread "main" class misc.LoggedException: Can't find image for input file name ND_p00_g70.hdr

________________________________
Da: Hall, Matt <matt.hall at ucl.ac.uk>
Inviato: giovedì 13 settembre 2018 10:42:33
A: stefania oliviero; camino-users at www.nitrc.org
Oggetto: RE: how to read a camino .Bfloat file in NODDI toolbox


Hi Stephania,



Camino provides tools to convert its internal bfloat (etc) formats to and from Nifti. Have a look at the DTI tutorial on the camino website, and also at the man page for the camino command voxel2image.



Hope this helps,

Matt.



From: camino-users-bounces at www.nitrc.org [mailto:camino-users-bounces at www.nitrc.org] On Behalf Of stefania oliviero
Sent: 13 September 2018 08:37
To: camino-users at www.nitrc.org
Subject: [Camino-users] how to read a camino .Bfloat file in NODDI toolbox



Hi all,

i generated the signal coming from one substrate obtaining a substrate.bfloat file.

I would like to read this signal in FSL and then, analyse it in NODDI toolbox, but I don't understand how to do this.

Which tranformation have I to do and which commands have I to do use ?

Thanks  everybody in advance



Cheers

Stefania Oliviero


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