[Mrtrix-discussion] outlier rejection in csdeconv?

[Kerstin Pannek]

Hi Chris

We are working on an outlier detection/rejection method based on spherical harmonics (see attached abstract presented at ISMRM). We are planning to include this in a future release, along with the modified csdeconv that ignores volumes/slices/voxels.

Cheers
Kerstin

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On 04/06/2012, at 4:00 PM, Chris Adamson wrote:

> List,
> 
> Are there plans to add a mask to ignore bad slices in DWI images in
> csdeconv? Artefacts such as kspace spikes, entire slice dropout, bad
> movement can cause entire slices to be rubbish. The feature need not
> identify the bad slices itself.
> 
> Chris.
> -- 
> Dr Christopher Adamson, PhD (Melb.), B Software Engineering (Hons.,
> Monash)
> Research Officer
> Developmental Imaging, Critical Care and Neurosciences
> 
> Murdoch Childrens Research Institute
> The Royal Children?s Hospital
> Flemington Road Parkville Victoria 3052 Australia
> T 9906 6780
> M XXXX XXX XXX
> E chris.adamson at mcri.edu.au
> www.mcri.edu.au
> 
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