[Mrtrix-discussion] nipype issue

[anvi vora]

Thank you all for help on this, I appreciate.

So the error seems to be because I am missing tensor2fa and tensor2vector,
among other things, which were not in my binary folder.  Then I checked CMD
folder, which ./build script calls, and these were missing from there are
well.  When I checked the latest commit for Mrtrix on Github (I had
downloaded from Github), these were not in CMD folder there either.  I then
saw them in the /mrtrix3/userdoc/commands folder as html files.

Sorry to ask, but how do I get these commands in CMD folder or as binaries?

Thanks again

On Wed, Dec 17, 2014 at 5:15 PM, Erik Ziegler <erik.ziegler at ulg.ac.be>
wrote:
>
> I'd say that Donald is right, it looks like you forgot to run sudo ./build
> install after ./build and that's why you don't have the binaries in your
> path.
>
> On Wed, Dec 17, 2014 at 9:02 PM, A.S. KANAAN <amadeus.kanaan at gmail.com>
> wrote:
>
>> you have  multiple mrtrix related crashes.. hard to say without looking
>> at the crash file.
>>
>> check the crash file by typing
>> $nipype_display_crash 'crash_file.......'
>>
>> a guess is that the mrtrix environ has not been initialized.
>>
>> but mabye the nipype guys have some other thoughts.
>>
>>
>>
>>
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>>
>>
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