CBICA: GLioma Image SegmenTation and Registration (GLISTR)
GLioma Image SegmenTation and Registration (GLISTR) is a software package designed for simultaneously segmenting brain scans of glioma patients and registering these scans to a normal atlas.
Some typical applications of GLISTR include,
Labeling entire brain regions of glioma patients;
Mapping gliomas into the healthy atlas space;
Estimating parameters of the tumor growth model.
GLISTR is implemented as a command-line tool. It is semi-automatic and requires minimal user initializations. Users could use the visual interface called BrainTumorViewer to easily make initializations and a script for the execution. As a results, GLISTR will output a label map, a mapping between atlas and input, tumor parameters, etc.
Some typical applications of GLISTR include,
Labeling entire brain regions of glioma patients;
Mapping gliomas into the healthy atlas space;
Estimating parameters of the tumor growth model.
GLISTR is implemented as a command-line tool. It is semi-automatic and requires minimal user initializations. Users could use the visual interface called BrainTumorViewer to easily make initializations and a script for the execution. As a results, GLISTR will output a label map, a mapping between atlas and input, tumor parameters, etc.
Execution Options
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Specifications
License:
Associations
execution requires:
is from the makers of:
CBICA: Brain Tumor Viewer (BTV)
CBICA: Geodesic graph-based segmentation with shape priors (GraSP)
CBICA: Identification of Sparse Connectivity Patterns in rsfMRI (SCPLearn)
CBICA: Laboratory for Individualized Breast Radiodensity Assessment (LIBRA)
CBICA: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters (MUSE)
CBICA: Multi Atlas Skull Stripping (MASS)
CBICA: Tutorials (Image Processing and Machine Learning) using CPP, ITK, etc.
CBICA: Cancer Imaging Phenomics Toolkit (CaPTk)
CBICA: Datasets
CBICA: Chimera
CBICA: WhiteStripe
CBICA: PREDICT
CBICA: PORTR
CBICA: ODVBA
CBICA: GONDOLA
CBICA: Brain Tumor Modeling - Coupled Solver
CBICA: Brain Anatomy Simulator
CBICA: Confetti
CBICA: Geodesic graph-based segmentation with shape priors (GraSP)
CBICA: Identification of Sparse Connectivity Patterns in rsfMRI (SCPLearn)
CBICA: Laboratory for Individualized Breast Radiodensity Assessment (LIBRA)
CBICA: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters (MUSE)
CBICA: Multi Atlas Skull Stripping (MASS)
CBICA: Tutorials (Image Processing and Machine Learning) using CPP, ITK, etc.
CBICA: Cancer Imaging Phenomics Toolkit (CaPTk)
CBICA: Datasets
CBICA: Chimera
CBICA: WhiteStripe
CBICA: PREDICT
CBICA: PORTR
CBICA: ODVBA
CBICA: GONDOLA
CBICA: Brain Tumor Modeling - Coupled Solver
CBICA: Brain Anatomy Simulator
CBICA: Confetti
works well with:
Recent Activity - Forums
GLISTR 3.1.1 install problem dependencies posted by panda sunny on Aug 1, 2018
GLISTR 3.1.1 install problem dependencies posted by Sarahi Rosas on Jul 18, 2018
Welcome to Open-Discussion posted by CBICA Software on Aug 19, 2016
Welcome to Help posted by CBICA Software on Aug 19, 2016
Recent Activity - Files
glistr-3.1.1_source.tar posted by CBICA Software on Nov 1, 2016