SINOMO (SIngular NOde MOtifs)
Network nodes can be described by node-motifs--a combination of local network features. Certain node-motifs, such as highly connected nodes or hubs, have been shown to be important components of networks. Costa et al. (2009) have presented a technique to detect and specify more complex compound motifs, which are characterised by multiple features in combination. We described improvements to that method and showed how its parameters can be determined automatically [Echtermeyer et al. 2011]. SIMONO is our implementation of the enhanced workflow, which can be controlled via a graphical user interface or through the command-line for batch processing.
Documentation is available at:
http://www.biological-networks.org/p/sin...
You can also directly download the Matlab/Octave code following the link below.
References:
* L. D. F. Costa, F. A. Rodrigues, C. C. Hilgetag, and M. Kaiser, Europhys. Lett., 87, 1, 2009
* C. Echtermeyer, L. Da Fontoura Costa, F. A. Rodrigues, M. Kaiser, PLoS ONE 6, 9, 2011
Documentation is available at:
http://www.biological-networks.org/p/sin...
You can also directly download the Matlab/Octave code following the link below.
References:
* L. D. F. Costa, F. A. Rodrigues, C. C. Hilgetag, and M. Kaiser, Europhys. Lett., 87, 1, 2009
* C. Echtermeyer, L. Da Fontoura Costa, F. A. Rodrigues, M. Kaiser, PLoS ONE 6, 9, 2011
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Welcome to Open-Discussion posted by Christian Haselgrove on Jan 30, 2012
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sinomo: SINOMO 2013-07 release
Documentation web-page posted by Christoph Feenders on Jul 4, 2013
sinomo: SINOMO 2013-07 release
SINOMO.zip posted by Christoph Feenders on Jul 4, 2013
SINOMO.zip posted by Marcus Kaiser on Jan 30, 2012