CONN : functional connectivity toolbox
CONN includes a rich set of connectivity analyses (seed-based correlations, ROI-to-ROI graph analyses, ICA, masked ICA, fc-MVPA, generalized PPI, ALFF, ICC, GCOR, LCOR, etc.) in a simple-to-use and powerful software package
CONN is available for resting state data (rsfMRI) as well as task-related designs. It covers the entire pipeline from raw fMRI data to hypothesis testing.
Highlights:
Comprehensive quality assurance methods/measures/displays (scrubbing/ART, CompCor/ICA/GSR denoising, GCOR/FD QC covariates)
Connectome-wide analyses (ICA, fc-MVPA)
Dynamic connectivity analyses (dyn-ICA)
FWE-control of connectivity matrices (NBS)
Non-parametric cluster-level statistics (permutation tests)
ANOVA, regression, longitudinal, and mixed designs
Parallelization options (SGE/Grid Engine, PBS/Torque, LSF, Slurm)
Mac/Windows/Linux/HPC
SPM8/SPM12
https://www.conn-toolbox.org
Execution Options
Specifications
Associations
Recent Activity - Forums
functional segmentation misalignement posted by Guillaume Carey 19 hours ago
ROI-ROI result posted by bioash on Feb 16
Harvard-Oxford atlas resolution and NBS analyses posted by Yann Quide on Feb 14
RE: Generating QA Plot Error posted by Alfonso Nieto-Castanon on Feb 12
Generating QA Plot Error posted by Emily Albertina on Feb 12
Check activation map for each subject posted by Tianming Guo on Feb 12
Recent Activity - News
Online CONN 2024 workshop registration open posted by Alfonso Nieto-Castanon on Feb 13, 2024
Online CONN 2023 workshop starting soon posted by Alfonso Nieto-Castanon on Nov 9, 2023
CONN new release posted by Alfonso Nieto-Castanon on Mar 15, 2023
CONN new release posted by Alfonso Nieto-Castanon on Feb 18, 2020
New CONN release and tutorials posted by Alfonso Nieto-Castanon on Jun 27, 2017
CONN New Year News posted by Alfonso Nieto-Castanon on Jan 12, 2017
CONN new release (15f) posted by Alfonso Nieto-Castanon on Sep 25, 2015
Announcing Cincinnati CONN course (MGH/HST) posted by Alfonso Nieto-Castanon on Jun 9, 2015
CONN v.13n Released posted by Alfonso Nieto-Castanon on Jul 8, 2013
conn toolbox version 13 released posted by Alfonso Nieto-Castanon on Oct 31, 2011
Recent Activity - Files
conn22v2407.zip posted by Alfonso Nieto-Castanon on Jul 9, 2024
conn: old releases: conn v.22.a (last 2022 release) release
conn22a.zip posted by Alfonso Nieto-Castanon on Mar 10, 2023
conn: older releases: conn v.21.a (last 2021 release) release
conn21a.zip posted by Alfonso Nieto-Castanon on Dec 31, 2021